Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 >seq12 Length=1023116 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||||||||| | || || ||||| || ||| | || ||| | | Sbjct 60297 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 60238 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || ||| || || |||||||| || | || |||||| Sbjct 60237 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 60178 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| ||||||| ||| || || ||| ||||||| || ||| || | |||||||| Sbjct 60177 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACACTGTCTGATTATAAC 60118 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||||||||| | ||||||||| || | || | ||||| Sbjct 60117 ATTCAGAAAGAATCTACGTTGCATTTAGTGCTGAGATTGAGAGGTGG 60071 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || ||||||| |||||||| || ||||| ||| | Sbjct 60753 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 60694 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || || ||||||| ||||||||||| |||| ||||| Sbjct 60693 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAG 60634 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || | || | ||| || || ||| ||||||| || ||| || |||| || || Sbjct 60633 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 60574 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||| || || || ||||||| ||||| Sbjct 60573 ATCCAAAAGGAGTCCACTTTACATTTGGTGTT 60542 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| || || || |||| || |||||||| ||| | || ||| | Sbjct 60069 ATGCAGATTTTCGTTAAGACACTGACGGGTAAAACCATAACCCTCGAGGTTGAATCGTCT 60010 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | || || ||||||| ||||||||||| |||| |||||| Sbjct 60009 GACACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 59950 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || | || | ||| || || ||| ||||||| || ||| || |||| || || Sbjct 59949 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 59890 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||| |||||||| ||||||| ||||| Sbjct 59889 ATCCAAAAGGAATCTACTTTACATTTGGTGTT 59858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039912351400