Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq11 165 2e-35
seq9 165 2e-35
seq12 159 6e-34
>seq11
Length=690553
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| |||| ||||| || ||||||||||| || || || | || || || ||
Sbjct 639479 CAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTC 639538
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| ||||| || || | |||||||||||||||||| || |||||||||||
Sbjct 639539 TTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGGATACCTTCCTTGTC 639598
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| ||||| || ||||||||
Sbjct 639599 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGT 639658
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 639659 CTTACCAGTCAAAGTCTTAACGAA 639682
>seq9
Length=443128
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||||| ||||| |||||||| ||||| || || || | || || || ||
Sbjct 63287 CAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 63228
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 63227 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 63168
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 63167 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 63108
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | |||||||| ||
Sbjct 63107 CTTACCAGTCAAAGTCTTGACAAA 63084
>seq12
Length=1023116
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || ||||||||||| || || || || || || |||||
Sbjct 470247 CAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATC 470188
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 470187 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 470128
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||| | ||| || ||
Sbjct 470127 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGT 470068
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 470067 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 470035
Score = 152 bits (168), Expect = 9e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| ||||| |||| || || || ||||||||||| || ||||| | || || || |||
Sbjct 59858 AACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 59917
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | ||||| || || || || | ||| ||||| || || ||||| ||||| |||||
Sbjct 59918 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCC 59977
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
||||| |||| ||||||| || || ||||| | ||||| || || | ||| ||||||
Sbjct 59978 TGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTT 60037
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || ||||| ||||| ||||||||
Sbjct 60038 TTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 150 bits (166), Expect = 3e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| ||||| |||| |||||||| ||||||||||| || ||||| | || || || |||
Sbjct 60542 AACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 60601
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | ||||| || || || || | ||| || || || || ||||| ||||| |||||
Sbjct 60602 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTCC 60661
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
||||| |||| ||||||| || || || || | ||||| |||||||| || ||||||
Sbjct 60662 TGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTT 60721
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || | |||||||| || || ||||| |||
Sbjct 60722 TTACCGGTCAAAGTCTTGACAAAAATTTGCATAATG 60757
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|| || || | ||| || ||||| || ||||||||||| || ||||| || || |||||
Sbjct 60089 ACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGACAGTGTTCTACCGTCTTCC 60148
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || ||||||||||| || ||||| || || || ||||||||
Sbjct 60149 AGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGG 60208
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||| || || ||||| | ||||| || || | ||| || |||||
Sbjct 60209 ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTA 60268
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||| || || |||||
Sbjct 60269 CCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622204155240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |