Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 >seq12 Length=1023116 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || |||| ||| | ||||| |||||||| ||| | || ||| | | Sbjct 60069 ATGCAGATTTTCGTTAAGACACTGACGGGTAAAACCATAACCCTCGAGGTTGAATCGTCT 60010 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| ||||||| || ||||| ||| | ||| | | ||| Sbjct 60009 GACACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 59950 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||||||||| || ||||| ||||| | ||| || |||| ||||| Sbjct 59949 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 59890 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||| | ||| |||| ||| | || |||| || Sbjct 59889 ATCCAAAAGGAATCTACTTTACATTTGGTGTTAAGACTAAGAGGTGG 59843 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || | || || || |||||||| |||| ||| | | Sbjct 60525 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 60466 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| |||||| ||||| || ||| | ||| | ||||| Sbjct 60465 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 60406 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || ||||| || || ||||| |||||| | ||| | |||| |||||| Sbjct 60405 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGTTATCCGACTACAAT 60346 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| |||||||||||||| || |||| || Sbjct 60345 ATTCAAAAGGAATCTACTCTCCACTTGGTCTT 60314 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || || |||||||| || ||||| ||| | | Sbjct 60753 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 60694 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| ||||||| || ||||| ||| | ||| | | || Sbjct 60693 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAG 60634 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||||||||| || ||||| ||||| | ||| || |||| ||||| Sbjct 60633 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 60574 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || ||||| || ||| | ||| |||| ||| | || |||| || Sbjct 60573 ATCCAAAAGGAGTCCACTTTACATTTGGTGTTAAGACTAAGAGGTGG 60527 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || | || || || ||||| ||| | || ||| | | Sbjct 59841 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATAACCCTCGAGGTTGAATCGTCT 59782 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | | ||| || ||| ||||| || ||| | ||| | ||||| Sbjct 59781 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAA 59722 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || ||||| || || ||||| |||||| | ||| | |||| |||||| Sbjct 59721 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACGTTATCCGACTACAAT 59662 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||||| |||||||| ||||| || |||| ||| Sbjct 59661 ATTCAAAAGGAATCCACTCTCCACCTGGTCTTA 59629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124725801018