Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 132 9e-26 >seq10 Length=743843 Score = 132 bits (146), Expect = 9e-26 Identities = 362/542 (67%), Gaps = 17/542 (3%) Strand=Plus/Plus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||||| ||||| | || || || ||| ||||||| || ||||| || | | Sbjct 391196 TGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGAT 391255 Query 42670 GGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||| | || | | ||||| ||| || || || || || |||||| || | |||| Sbjct 391256 GGATTCA-AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCGAA 391314 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787 || |||||||||| || ||||||||||||| |||||| | ||| ||| |||| | ||| Sbjct 391315 GGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTAT-GAT 391373 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 |||||| | |||||||| |||||| | || |||| ||||| || |||| | ||||| Sbjct 391374 GCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTT 391433 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGC--GGGTCCGG 42905 ||| ||| | ||||| | ||| | | | |||| || || ||| || Sbjct 391434 TGCATGCTTGTTGTTCGC---CCATTTGAAGAACAAACC--AGACCCAGCCATTGTTGAA 391488 Query 42906 GCCATCATCACGGAGGCCGTGGAGATCG-AGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 || |||| ||||| ||||| || | | || || | | || | | | |||| || Sbjct 391489 AAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGATGCCTTGCCAGT 391547 Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024 || || | || |||||| ||||| ||| | | ||| | ||| ||| || ||| Sbjct 391548 TGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTGACAG 391607 Query 43025 TCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCG--TGCCCCTTCGACTTT 43082 || || | | ||| || ||||| | | || ||||||||||||| Sbjct 391608 ACTTTTGGTCGCCTTTGGTAACAAGAAATACTACA--AGGTCGAAAACCCCTTCGACTTT 391665 Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| |||||||| |||| || ||||||||||| || || ||| | ||| | || ||| Sbjct 391666 ATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCTGATTAC 391725 Query 43143 CA 43144 || Sbjct 391726 CA 391727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338999327920