Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 176 5e-39 >seq5 Length=565208 Score = 176 bits (194), Expect = 5e-39 Identities = 818/1293 (63%), Gaps = 38/1293 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||||| || ||| ||||| || ||||| | |||||| ||||||| ||||| Sbjct 296715 TACATATTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGACGTGGAT 296656 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| ||||||||| | ||| | | ||| | | | | | |||| Sbjct 296655 GCAGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTTCATGACATCTTCC 296596 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121 | | | ||||| || | || | | | | ||||||||| ||||| || Sbjct 296595 CTCAAAGTATCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGT 296536 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181 |||||||| || ||||| || || | || || |||||||| || || | || | | Sbjct 296535 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGT 296476 Query 114182 TC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 114237 || | |||| | | |||| | ||||| ||||| ||||| || | ||| | Sbjct 296475 TCACAAGAAGCTTCCATAGAGG----CATGATAAATTGTTTCAAAGATTTGGATATTTAG 296420 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 114297 | |||||| || |||||||| | | || ||| || || || || | ||| Sbjct 296419 TAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACC 296360 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGG 114357 ||| ||||| | ||||||| | |||||||||||| || || || || || || Sbjct 296359 TTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATCTTTTCGCTTCTTCAACAGG 296300 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || |||| | ||| ||||| || |||| ||| || ||||| || | ||||| || Sbjct 296299 GTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTG 296240 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGT---------CTCT------TCATTGACATACTT 114462 | |||| | | | | | ||| |||| ||| ||| || || Sbjct 296239 TAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA-ATGCT- 296182 Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 || | ||| | || |||| ||||| |||| || || ||| | | | |||||| | Sbjct 296181 -GGCAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAAC 296123 Query 114523 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 114582 |||||| || || ||||| ||| || || ||||| ||||| || |||||| | Sbjct 296122 AATTTCACAGCATAAGTTTGATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCT 296063 Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 ||| || |||||||| |||| | | || || ||||| || ||||| | | | ||| Sbjct 296062 GTTGCAAGCATCCTTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAAT 296003 Query 114643 AGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 | | ||| | | || | | ||| || | || || || | ||||| Sbjct 296002 GGAATACCATAATTTTTGAGC---CTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCG 295946 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGTGCCTTATCT 114760 || || || ||||||||||| || || || | | || ||| || || || | Sbjct 295945 GGTATATAGAGCTTCAAACTCGTCGCCATAACAGTCGCTTAGA--CCAGGAGCGGCTGTT 295888 Query 114761 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820 || |||| | || ||| ||| ||| ||||||||||||||||| || || || ||| Sbjct 295887 GGAGAGAACAAAGTCCAAGTCCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATC 295828 Query 114821 CAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880 || ||||| | || | ||| | ||| |||||| | || || || | | Sbjct 295827 CATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATA 295768 Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC---- 114936 || | ||| || | ||||| || ||||| ||||||||||||| || | | || Sbjct 295767 TCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGT 295708 Query 114937 CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 ||| | |||| |||||| ||||| | || ||| |||||| || |||| ||| || Sbjct 295707 CTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGG 295649 Query 114997 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 115056 ||| | || | ||| || ||||| || ||| ||| | | | | | || Sbjct 295648 AATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATT 295589 Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 |||||| || | ||||||||| || || || || || || || || | | | | Sbjct 295588 ATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGT 295529 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | |||| || || ||||| ||||| |||| | |||| | ||| || |||||||| Sbjct 295528 GTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTG 295469 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 115209 || |||| |||||||| || || | ||||| Sbjct 295468 AGGTTTTGGAGTACCAGCATTAAACAAAGTTGG 295436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360