Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 3e-22
seq9 87.8 2e-12
seq11 86.0 6e-12
>seq12
Length=1023116
Score = 120 bits (132), Expect = 3e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|| || ||||||| | || |||||||| |||||||||||| || || | |||
Sbjct 59858 AACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 59917
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| ||||| ||||| | | |||| | | |||||| || ||||| ||||||||||||||
Sbjct 59918 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTC- 59976
Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| |||||| || | | || | ||||| | ||| || ||||||| || | ||
Sbjct 59977 CTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGT 60036
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| ||||| || || || |||||||||||
Sbjct 60037 TTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 102 bits (112), Expect = 8e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || ||||||||||| |||||||||
Sbjct 60299 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 60358
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || ||||| ||||||| | | || | | ||||||||| |||||
Sbjct 60359 AACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 60418
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| || || ||| |||| | || | |||| | | ||||||| || || |
Sbjct 60419 ATACCTTCCTTATCT-TGAATTTTCGACTTGACGTTGT-CAATCGTGTCGGAAGATTCGA 60476
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || ||||||||||| || || ||||| ||||||||
Sbjct 60477 CCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|| || ||||||| | ||||||||||| |||||||||||| || || | |||
Sbjct 60542 AACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 60601
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| ||||| ||||| | | |||| | | ||| || || ||||| ||||||||||||||
Sbjct 60602 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTC- 60660
Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| |||||| || | | || | || || | || || || || | || | ||
Sbjct 60661 CTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGT 60720
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| |||| ||| || |||||||| |||||
Sbjct 60721 TTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
Score = 100 bits (110), Expect = 3e-16
Identities = 144/197 (73%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479
|| ||||||||||| ||||||||| | || | || | || || ||||| |||||||
Sbjct 59648 GATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA-TCTTCCAGTTGCTTACCGGC 59706
Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539
| | || | | ||||||||| ||||| |||||||| || || ||| | || | || |
Sbjct 59707 AAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCC-TGAATCTTGCTCTTCA 59765
Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597
|||| | | ||||| | ||| || ||||||| || | || ||||||||||| ||
Sbjct 59766 CGTTGT-CAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTCTTACCAGTCAGCGTC 59824
Query 138598 TTTACAAAAATCTGCAT 138614
|| ||||| ||||||||
Sbjct 59825 TTAACAAAGATCTGCAT 59841
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | || |||||||| | | || || || |||||||| || || |
Sbjct 60071 CCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGAC 60130
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || ||||| ||||| | | | || || | ||||| || || ||
Sbjct 60131 AGTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 60190
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| |||||||| ||| || ||| | | || | ||||||| || || |||
Sbjct 60191 ATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 60250
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||||||||| |||||||| |||||||| |||||
Sbjct 60251 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
>seq9
Length=443128
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| |||| | || || ||||||||||||||||| |
Sbjct 63301 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63242
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 63241 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63182
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 63181 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 63124
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 63123 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63083
>seq11
Length=690553
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | |||||| ||||||| | || |||||||| |||||||||||
Sbjct 639465 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 639524
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||||| | |||| | | |||||||| || ||
Sbjct 639525 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGG 639584
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| || || | |||| || | |||||| | || || ||
Sbjct 639585 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCAGAAGATTCAAC 639643
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
|| | || | || |||||||||| ||| || || ||
Sbjct 639644 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 639682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262294544240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |