Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 6e-24
seq5 86.0 6e-12
>seq12
Length=1023116
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || ||||||||||| ||||| || ||| | ||| || |
Sbjct 60311 CTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTACCA 60370
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| || ||||| || ||||| ||||| |||
Sbjct 60371 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTA 60430
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| |||| || | || | ||||||||||| ||||| || |||||||
Sbjct 60431 TCTTGAATTTTCGACTTGA-CGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAAT 60489
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| || |||||
Sbjct 60490 GGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 122 bits (134), Expect = 8e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| || ||||| | ||| | || || ||||||||||| || || ||| | |||| ||
Sbjct 60536 AGTCTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 60595
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| |||| ||| || || || | ||||||| ||||| || || ||||| ||||||
Sbjct 60596 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCT 60655
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| || ||||||||| |||| || | || | || || ||||| |||||||| | ||
Sbjct 60656 TTGTCCTGAATTTTTGACTTGA-CGTTATCAATAGTATCAGAAGATTCGACTTCCAATGT 60714
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || ||||||||||||||
Sbjct 60715 TATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
Score = 118 bits (130), Expect = 1e-21
Identities = 186/264 (70%), Gaps = 7/264 (3%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || || | ||| | |
Sbjct 470249 CTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCA 470190
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 470189 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 470130
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 470129 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATA 470070
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC---GC---GCGACCAATTTAATAA 45359
|| || ||||||| ||| || || |||||||||||| || || | || |||| ||
Sbjct 470069 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCTTGTCGGCAAAATTAA-AA 470011
Query 45360 TTTAACTCTTATTTTCTTACTAAG 45383
||||||| | |||||||| |||
Sbjct 470010 TTTAACTGCTTCTTTCTTACCAAG 469987
Score = 116 bits (128), Expect = 3e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| ||||| ||||| ||| ||||| || || || |||||||| | ||| ||
Sbjct 60083 CTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGACAGTGTTCTACCG 60142
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | || | || ||| || || || || || || |||||
Sbjct 60143 TCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTTG 60202
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || ||||| || | || | ||||||||||| || || || || || |
Sbjct 60203 TCTTGGATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 60261
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || ||||||||||| ||||||||||||||
Sbjct 60262 AGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
Score = 109 bits (120), Expect = 5e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| || ||||| | ||| | || |||||||||||||| || || ||| | |||| ||
Sbjct 59852 AGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 59911
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| |||| ||| || || || | ||||||| || || || || ||||| ||||||
Sbjct 59912 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCT 59971
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| || ||||||||| |||| || | || | ||||| || || || || ||||| ||
Sbjct 59972 TTGTCCTGAATTTTTGACTTGA-CGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGT 60030
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || || || || || || ||||| |||||
Sbjct 60031 TATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
||| || || || || || || ||||||||||| ||||| || ||| | ||| |
Sbjct 59626 CCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCC 59685
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| ||| || || || | ||||||| || ||||| || ||||| ||||| ||
Sbjct 59686 ATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 59745
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||| ||||| || || | || | || | ||||| || || || || ||||| || |
Sbjct 59746 ATCCTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCAGACGATTCAACCTCGAGGGTTA 59804
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| || |||||
Sbjct 59805 TGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 59841
>seq5
Length=565208
Score = 86.0 bits (94), Expect = 6e-12
Identities = 206/312 (66%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891
|||| | | |||| |||||||| | |||||| || ||| ||||| || ||||
Sbjct 295247 GATTTCCAGTACAGTTATTTTGGTTTCAAAACTTTGGAACGTTCTTATTTACTAAGAATC 295306
Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951
| | | || ||||||||| ||||| | | ||| | ||||| | ||| | |||
Sbjct 295307 AACGGTCAAGTGGCCGAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCAC 295366
Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011
|| | ||||||||| || ||||| || | || ||||||| ||||| || ||
Sbjct 295367 GGCAGAGACATCGAAGCGGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACT 295426
Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071
|| || ||| |||||||| || || || ||||| |||| || |||||
Sbjct 295427 CATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTC 295486
Query 123072 TTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCG 123131
||| || || || || ||| ||| ||||| || || |||||| || || ||
Sbjct 295487 TTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCT 295546
Query 123132 TTGATTTCCAAA 123143
||||||||||||
Sbjct 295547 TTGATTTCCAAA 295558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003103949320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |