Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 158 1e-33 >seq5 Length=565208 Score = 158 bits (174), Expect = 1e-33 Identities = 723/1135 (64%), Gaps = 40/1135 (4%) Strand=Plus/Minus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 ||||||||||| ||||| || |||||||| || ||||| || || | || || || ||| Sbjct 296556 TCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTAT 296497 Query 116122 GGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177 || || || | || | ||| | |||| | | |||| | ||||| ||||| Sbjct 296496 GGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATAGAGG----CATGATAAATTGT 296441 Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237 ||||| || | ||| | | |||||| || |||||||| | | ||| ||| Sbjct 296440 TTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAA 296381 Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 || || || || | |||||| ||||| | ||||||| | |||||||||||| || Sbjct 296380 CATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGA 296321 Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 || || || || || || |||| | ||| ||||| || |||| ||| || Sbjct 296320 TCTTTTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGT 296261 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTT------TCGTAATCAAAACT---GCGAGTCTC 116408 ||||| || | ||||| || | ||| | ||| | || | || ||| Sbjct 296260 AACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTC 296201 Query 116409 ------TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462 |||| ||| || || || | ||| | || |||| ||||| |||| || || Sbjct 296200 TGACGTTTCAATGA-ATGCT--GGCAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTC 296144 Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522 ||| | | | |||||| | |||||| || || ||||| ||| || || || Sbjct 296143 GTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATAACACCTAA 296084 Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGT 116582 ||| ||||| || |||||| |||| || |||||||| || | | | | || || ||||| Sbjct 296083 GTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAACGACAAAAGGTGTACCCGT 296024 Query 116583 CTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGC 116642 || ||||| | | | ||| | | ||||| || | | | | ||| || | Sbjct 296023 TTCAGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG--AGCCTTAATGGTCTTACC 295967 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCT 116700 || || || | ||||| || || || || |||||||| || || |||| | || Sbjct 295966 ACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCGCCATAACAGTCGCT 295907 Query 116701 GAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760 ||| || || || |||| |||| | || ||| ||| ||| ||||| ||| Sbjct 295906 TAGA--CCAGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCAACACGC 295849 Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820 |||||||| || || || ||||| || || | || | ||| | ||| |||||| Sbjct 295848 TTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCT 295789 Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880 | || || || | | || | ||| || | ||||| || ||||| ||||||||| Sbjct 295788 TTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGG 295729 Query 116881 TACACCGCGATTGACCC----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGC 116936 |||| || | | || ||| | |||| |||||| ||||| | || || Sbjct 295728 TACAGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTGTT 295670 Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACG 116996 ||||| || |||| ||| ||||| | || | ||| || ||||| || ||| Sbjct 295669 ATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTA 295610 Query 116997 AG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 || || ||| | | | || ||||| || | ||||||||| || || || || | Sbjct 295609 AGAACCAGTT-GAACGAATATTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAA 295551 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | || || || | | | || |||| || || ||||| ||||| |||| | |||| Sbjct 295550 TCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGA 295491 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 | ||| || |||||||| || |||| |||||||| || || | ||||| Sbjct 295490 CCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGG 295436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507069629720