Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 1e-33
>seq5
Length=565208
Score = 158 bits (174), Expect = 1e-33
Identities = 723/1135 (64%), Gaps = 40/1135 (4%)
Strand=Plus/Minus
Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121
||||||||||| ||||| || |||||||| || ||||| || || | || || || |||
Sbjct 296556 TCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTAT 296497
Query 116122 GGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
|| || || | || | ||| | |||| | | |||| | ||||| |||||
Sbjct 296496 GGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATAGAGG----CATGATAAATTGT 296441
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||||| || | ||| | | |||||| || |||||||| | | ||| |||
Sbjct 296440 TTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAA 296381
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
|| || || || | |||||| ||||| | ||||||| | |||||||||||| ||
Sbjct 296380 CATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGA 296321
Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357
|| || || || || || |||| | ||| ||||| || |||| ||| ||
Sbjct 296320 TCTTTTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGT 296261
Query 116358 GACAACCTTTGTGATTTCATGAAGCTTT------TCGTAATCAAAACT---GCGAGTCTC 116408
||||| || | ||||| || | ||| | ||| | || | || |||
Sbjct 296260 AACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTC 296201
Query 116409 ------TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462
|||| ||| || || || | ||| | || |||| ||||| |||| || ||
Sbjct 296200 TGACGTTTCAATGA-ATGCT--GGCAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTC 296144
Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522
||| | | | |||||| | |||||| || || ||||| ||| || || ||
Sbjct 296143 GTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATAACACCTAA 296084
Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGT 116582
||| ||||| || |||||| |||| || |||||||| || | | | | || || |||||
Sbjct 296083 GTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAACGACAAAAGGTGTACCCGT 296024
Query 116583 CTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGC 116642
|| ||||| | | | ||| | | ||||| || | | | | ||| || |
Sbjct 296023 TTCAGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG--AGCCTTAATGGTCTTACC 295967
Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCT 116700
|| || || | ||||| || || || || |||||||| || || |||| | ||
Sbjct 295966 ACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCGCCATAACAGTCGCT 295907
Query 116701 GAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760
||| || || || |||| |||| | || ||| ||| ||| ||||| |||
Sbjct 295906 TAGA--CCAGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCAACACGC 295849
Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820
|||||||| || || || ||||| || || | || | ||| | ||| ||||||
Sbjct 295848 TTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCT 295789
Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880
| || || || | | || | ||| || | ||||| || ||||| |||||||||
Sbjct 295788 TTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGG 295729
Query 116881 TACACCGCGATTGACCC----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGC 116936
|||| || | | || ||| | |||| |||||| ||||| | || ||
Sbjct 295728 TACAGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTGTT 295670
Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACG 116996
||||| || |||| ||| ||||| | || | ||| || ||||| || |||
Sbjct 295669 ATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTA 295610
Query 116997 AG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055
|| || ||| | | | || ||||| || | ||||||||| || || || || |
Sbjct 295609 AGAACCAGTT-GAACGAATATTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAA 295551
Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115
| || || || | | | || |||| || || ||||| ||||| |||| | ||||
Sbjct 295550 TCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGA 295491
Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170
| ||| || |||||||| || |||| |||||||| || || | |||||
Sbjct 295490 CCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGG 295436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507069629720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |