Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 4e-21
seq11 98.7 1e-15
>seq12
Length=1023116
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| || | ||| |||| || | ||| |||||||| |||||||||||||||
Sbjct 60299 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 60358
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | | || || || ||||| ||||| || ||||| | ||| ||||| | ||
Sbjct 60359 AACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 60418
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| | ||||| || || ||| ||||| ||| | | | ||||||| ||||| ||
Sbjct 60419 ATACCTTCCTTATCTTGAATTTTCGACTTGA-CGTTGTCAATCGTGTCGGAAGATTCGAC 60477
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || ||||| || || |||||||| ||||||||||| |||||
Sbjct 60478 CTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 105 bits (116), Expect = 8e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|||||||| |||||||||||||||| || | | || || || ||||| ||||| ||
Sbjct 59651 TCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAA 59710
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| | ||| ||||| | || | | ||||| ||| ||||| |||| | |||
Sbjct 59711 ATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTTGCTCTTCA-CGTT 59769
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| |||||| || || | || ||||| || || |||||||| |||||
Sbjct 59770 GTCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTCTTACCAGTCAGCGTCTTAAC 59829
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 59830 AAAGATCTGCAT 59841
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||||| | ||||||| ||| || ||| ||||||||||| |||||||||||
Sbjct 59843 CCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 59902
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | |||| || || ||||| || || || ||||| | ||| || || | ||
Sbjct 59903 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 59962
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || |||||| || || ||||| | | | ||||| |||||| ||
Sbjct 59963 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACC 60022
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | || |||||||| |||||||| || ||||| || || |||||
Sbjct 60023 TCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||||| | ||||||| ||| || || |||||||||||| |||||||||||
Sbjct 60527 CCACCTCTTAGTCTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 60586
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | |||| || || ||||| || || || ||||| | |||||| || | ||
Sbjct 60587 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGA 60646
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | || |||||| || || ||||| | | | || || ||||| ||
Sbjct 60647 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACT 60706
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || |||||||| || |||| || || ||||| ||||||||
Sbjct 60707 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
>seq11
Length=690553
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||||||| | ||| |||| ||| || || ||||||||||| |||||||| |||
Sbjct 639465 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 639524
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| | |||| || | ||||| ||||| || ||||| | || ||||||| ||
Sbjct 639525 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGG 639584
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||| |||||| ||||| | | | ||||| ||||| ||
Sbjct 639585 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 639644
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585
|| | |||||||| || || |||| || ||||| |||
Sbjct 639645 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 639683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238279886840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |