Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 seq9 158 2e-33 >seq5 Length=565208 Score = 250 bits (276), Expect = 3e-61 Identities = 836/1281 (65%), Gaps = 50/1281 (4%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | || || |||||||| |||| ||| ||||||||| ||||||| | | || Sbjct 295436 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 295495 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | |||||||| || ||| | || ||||||| |||| | | |||||||| || || Sbjct 295496 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 295555 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTAT 111898 || ||||||||||| || | || |||||| || | | | ||| || || || Sbjct 295556 AAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTC-AACTGGTTCTTACAT 295614 Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958 | |||||||| ||| || | || | ||||| ||| |||| || ||||| ||| Sbjct 295615 TGCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAACAC 295674 Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC------TATCT 112012 || || ||||| |||| | ||| | ||| || || ||| | || || Sbjct 295675 CGCCCGTTATGTCGACCAGGGTGG---TAACAAAAGACCTGGCGCCTTTGCCCTGTACCT 295731 Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072 || |||||||| || ||||| | || || |||| | | ||||| ||| | || Sbjct 295732 GGAACCATGGCATGCTGATATTTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGA 295791 Query 112073 GGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 112131 || || ||| | ||| | || | ||||| |||||||| ||||| ||||||||| Sbjct 295792 AGAAATTCG-TGCAAGAGATTTGTTTCCTGCTCTATGGATTCCTGATCTTTTCATGAAGC 295850 Query 112132 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GCACCCGGTCTCTCC 112190 | ||||| |||| ||| | |||| || | || | |||| ||| || || ||||| | Sbjct 295851 GTGTTGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCTGGTCTAAGC 295909 Query 112191 GA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGC 112249 || || ||| || ||||||||||| || || || ||||| ||||| |||| | Sbjct 295910 GACTGTTATGGC-GACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG- 295967 Query 112250 GACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 112309 | ||| | ||| | | ||| | | ||| | | | ||||| || || Sbjct 295968 --GTAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAAC 296025 Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 |||||||| | | | |||| || || || || ||| |||| ||| ||||| || || Sbjct 296026 GGGTACACCTTTTGTCGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTT 296085 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 ||||| |||||| || ||| | || ||||| | || | ||| || || Sbjct 296086 AGGTGTTATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGA 296145 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCA--AGTATGTGGATC--CAGA-- 112483 || ||||| |||||| | || || | || || ||| | | || | | |||| Sbjct 296146 AACTGCTGTTTGTAACTTGGCTTCTGTTGC-CTTGCCAGCATTCATTGAAACGTCAGAGG 296204 Query 112484 ---GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAA 112536 | |||| |||| | | ||||| | |||||| || | ||| ||| || Sbjct 296205 ACGGCCAAACTTCTACATACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTC 296264 Query 112537 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 112596 || ||||||||||||||||| | |||| ||||| ||||| || | ||| | Sbjct 296265 GTAATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAAAAGATCCA 296324 Query 112597 ATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTT 112656 |||||||||| | ||||||| | | ||||| |||||| | || || |||| | Sbjct 296325 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTTTGGCTGACACTTTCA-----T 296379 Query 112657 GTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGA 112711 || || ||| | |||||||| || || || | | ||| | || ||||| Sbjct 296380 GTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTTGA 296439 Query 112712 GACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATA 112771 ||||| ||||| ||| || | || || || || | || | || || ||||| Sbjct 296440 AACAATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGACCATA 296499 Query 112772 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGG 112831 |||||||| | |||||||||||||| ||||| | ||||| || |||||||||| | Sbjct 296500 CGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ACC 296558 Query 112832 TGAGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTC 112890 | ||| | || | || ||||| || | | |||| ||| | || | ||| Sbjct 296559 AAAAACCCTACGGCATGTGGGATTGGGATACTTTGAGGGAAGATGTCATGAAGCATGGTA 296618 Query 112891 TTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 112948 || | ||| ||||| |||||||||||||| || || ||||| | ||||| ||||| Sbjct 296619 TTAGAAAC--TCTTTGACCATGGCACCAATGCCTACTGCATCCACGTCCCAAATATTGGG 296676 Query 112949 TAATAATGAATGCTTTGAACC 112969 | |||||||||| |||||||| Sbjct 296677 TTATAATGAATGTTTTGAACC 296697 >seq9 Length=443128 Score = 158 bits (174), Expect = 2e-33 Identities = 601/930 (65%), Gaps = 20/930 (2%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 |||||||| ||||||| | ||| || | | ||||||| | |||| || Sbjct 235174 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCA 235115 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| |||||| || || | ||||| || ||| | |||||||| || ||||| ||| Sbjct 235114 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGAT 235055 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAAC 111724 ||||| || |||| ||| | |||||| | ||| |||| ||||| | ||||| Sbjct 235054 TCTGTGCTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAAC 234996 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | | || ||||||||||| ||| ||||||||||| |||||||| ||||| | || Sbjct 234995 CTTATTTAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAA 234936 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||| || || || | || ||||| | ||| | | |||||||| || || ||| Sbjct 234935 GGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGAC 234876 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAG 111903 || |||||| | || | || || | | || | || ||| | ||| ||| | Sbjct 234875 TGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCC-ACAGGTTCTTATATCGCCG 234817 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || ||| ||| |||| | ||||| ||| |||| || || ||| || || | Sbjct 234816 GTACCAACGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTC 234757 Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGT-----CTATCTT-GAGC 112017 | ||||| ||||| || || |||| || || || | | |||| || | Sbjct 234756 GTTATGTGGACCAA---GGAGGTAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAAC 234700 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 |||||||||| |||||| | || || | || | | | ||| ||| | || || Sbjct 234699 CATGGCACGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAA 234640 Query 112078 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | |||| | ||| | ||| | ||||| |||||||| || || || ||||| | ||| Sbjct 234639 TTC-GTGCAAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTT 234581 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 | ||| ||| ||| || | |||| ||| || || ||| | |||| | Sbjct 234580 CAAGAGGATGGTCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTC 234521 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 |||||| || ||||||| || || || ||||| ||| |||| | | Sbjct 234520 TGGGGTGACGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAA 234464 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTAC 112315 || | ||| | | ||| | || ||| | |||| | ||||| || || ||||| Sbjct 234463 ACCATTAAAGCCCAAAAGTTATGGTATGCCATTTTACAAG-CACAAACAGAAACAGGTAC 234405 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 ||| | ||| ||||||| ||||| |||||| ||||| || ||| |||| |||||| Sbjct 234404 ACCTTTCATGGTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTAC 234345 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || |||||| | ||| |||||| | || | | | | |||||| || || Sbjct 234344 CATTAAATCATCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGC 234285 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 || ||||| || || || || || ||||| Sbjct 234284 CGTTTGTAATCTAGCCTCTATTGCCCTCCC 234255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240