Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 289 3e-73 seq9 262 5e-65 >seq5 Length=565208 Score = 289 bits (320), Expect = 3e-73 Identities = 902/1382 (65%), Gaps = 36/1382 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 |||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 296697 GGTTCAAAACATTCATTATAACCCAATATTTGGGACGTGGATGCAGTAGGCATTGGTGCC 296638 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070 || ||||| ||| | || ||| | | | ||| |||| | | | |||||| | Sbjct 296637 ATGGTCAAAGA--GTTTCTAATACCATGCTTCATGACATCTTCCCTCAAAGTATCCCAAT 296580 Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | | || | || || ||||||||||| || ||||| | ||||| || | | Sbjct 296579 CCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCTG 296520 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 ||||||| | || || || || | || | || ||| | |||||| || |||| Sbjct 296519 GAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCA 296460 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 || || ||||| || ||||||||||| | ||| | ||| || || |||| Sbjct 296459 TAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAAT 296400 Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310 |||| | | || ||| || || || || | |||||||||||||||| |||| | Sbjct 296399 CAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTG 296340 Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370 |||| |||| |||||| || || ||| ||||| || || |||| | ||||| | Sbjct 296339 GTCTATGTCTCATATTGGATCTTTTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAA 296280 Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAAT 106424 ||| ||||| ||| ||||||| || | ||||| || || ||||| | || Sbjct 296279 CTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATG 296220 Query 106425 CAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 | |||| || ||| |||| ||| || | ||| | ||| | || |||| Sbjct 296219 TAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA-ATGC--TGGCAAGGCAACAGAAGCCA 296163 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| || || ||| | ||| |||||| | |||||| || ||||| | Sbjct 296162 AGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTG 296103 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| || || || || ||||||||| |||| ||||||| |||||||| || | Sbjct 296102 ATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAA 296043 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA-CACATCGGCG 106654 | | || || ||||| || || |||| | | ||| | | ||| | | | | Sbjct 296042 CGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAG 295983 Query 106655 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || ||||| || | || || || ||||| || || || ||||||||| Sbjct 295982 CCT----TAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAAC 295927 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 106773 || || || |||| ||||| || || ||| |||| |||| | || ||| Sbjct 295926 TCGTCGCCATAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAGT 295868 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 ||| ||| ||||| |||||||||||||| || |||||||| || | | ||| | ||| Sbjct 295867 CCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATC 295808 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 ||| ||| ||||| | ||| ||||| || | |||| || || | ||||| Sbjct 295807 TCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATC 295748 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949 || |||||||| || || || | || | | || |||| | ||| | || | Sbjct 295747 AGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGGT 295689 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 ||||| || || ||| ||||| || |||| ||| ||||| | || | || || Sbjct 295688 CGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTAC 295629 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | ||||| || ||| ||| | | | | | || |||||| || | ||||||| Sbjct 295628 CGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATAC 295569 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | ||||| || || || ||||| || | | ||| | || ||||| | ||| | Sbjct 295568 CACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAG 295509 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189 |||||||||| |||||| | ||| ||| |||||| || ||| |||| |||||||||| Sbjct 295508 AGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCAT 295449 Query 107190 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCC 107248 | || | ||||| | || ||| | || || || | ||||| || ||||| || Sbjct 295448 TAAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTCT 295390 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308 | | | || |||||| ||||||||||| | || || | ||||| | || ||| Sbjct 295389 AGAGCCGCTTCGATGTCTCTGCCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGT 295330 Query 107309 GG 107310 || Sbjct 295329 GG 295328 >seq9 Length=443128 Score = 262 bits (290), Expect = 5e-65 Identities = 804/1231 (65%), Gaps = 34/1231 (3%) Strand=Plus/Plus Query 106096 CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGA 106155 |||||| |||||||| || | |||| || | |||||||| || || || ||| Sbjct 233882 CCACATGTCAAATTGTAGAATACCTTTAGAGGCTGGAGAACCTTCGAAAGTAGAATACTT 233941 Query 106156 ACCTTGGGCTTCAG--CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 ||||| |||| | ||||||||||| || || || | || ||||| |||||||| Sbjct 233942 ACCTTC--CTTCTGTGCCAATTCACAGGAGGCTTCAAGAGTAGCATGATAAATGGTTTCG 233999 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAAT 106272 || || | |||| | ||||| ||||| ||||| | |||| ||| || || Sbjct 234000 AAAATCTGTTTGTTCAAAGTTTGAGCTTCTTCTGATTCAAAAG-GTAGACGCAACATCAT 234058 Query 106273 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 106332 | | ||| || ||||||||||||||||| |||||||||| || | |||||| || || Sbjct 234059 ATAGGTATCGGCCAGACCTTGAACACCCAAGGCAATAGGTCTATGCCTCATATTTGAATT 234118 Query 106333 TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 || || ||| |||||| |||| | ||| ||||||| ||| | || | ||||| Sbjct 234119 TCTGGCTTCAGGAACTGGATAATAATTACGGTCGATGACTCTGTTCAAGTTATGGGTAAT 234178 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA-- 106444 | || | |||||||| | | || ||| | || | ||| |||||| Sbjct 234179 GACTTTAGCAATTTCATGTAAACTCTCGAAATTATAACTTGCAGTTTTACCATCTTCAGA 234238 Query 106445 ----TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 106500 | |||| | ||| ||||| || || || | ||| ||||| || || ||||| Sbjct 234239 CATCTCGACAAATGCTGGGAGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGG 234298 Query 106501 ATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 106560 | ||||| | ||||| |||||||||||| ||||| || ||||| |||| Sbjct 234299 GGAAGAATACTCGACGATTTCACAACACAAGTTGGATGATTTAATGGTACCCAAGTTCTG 234358 Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620 |||||| ||||| |||| || || |||||||| | |||| | || || || || || || Sbjct 234359 TTGGTTTGTCTTTCTGTTACATGCGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGT 234418 Query 106621 CTGTGACTTG-AGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTC 106679 |||| |||| | ||| || | ||| | | ||| | ||||| || | || | Sbjct 234419 TTGTG-CTTGTAAAATGGCATACCATAACTTTTGGGC---TTTAATGGTTTTACCACGAC 234474 Query 106680 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 106739 | ||| ||||| || || || ||||||| || |||||| | || | || Sbjct 234475 CTTCCCTTTCGTAACGGGTATATAGCTCTTCAAATTCGTCACCCCAGACATCATCTAAAC 234534 Query 106740 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 106799 |||| || ||| | || | || ||| ||||| |||| | ||| || ||||| | Sbjct 234535 CTGGGGCAGCACTGGGAGAAAATAAAGTCCAGGGACCATCCTCTTGAACACGTTTCATAA 234594 Query 106800 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTT 106859 ||||||| ||||||||||| | | || | ||| || ||| ||||| | ||| | Sbjct 234595 AAAGGTCAGGAATCCACAGAGCAGGGAATAAATCCCTTGCACGAATTTCTTCTTTACCAT 234654 Query 106860 GGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAGATA---- 106914 || | || | || | || || | |||||| ||||||||||| | ||||| | Sbjct 234655 GGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCGTGCCATGGTTCCAAGAAAAGGG 234714 Query 106915 -GACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAA 106973 | || || || ||| | || |||| | ||||| || || || ||| | Sbjct 234715 CAAAGGCACCAGGTCTCTTGTTA---CCTCCTTGGTCCACATAACGAGCAGTATTGTTGA 234771 Query 106974 ATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATT 107033 | || |||| ||| ||||| | |||| ||| ||| || || || ||| ||| Sbjct 234772 AAACACGAATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGAAC 234831 Query 107034 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 107093 ||| | | | | || || | |||| ||| || || ||| || || | Sbjct 234832 CTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATAG 234891 Query 107094 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 107153 |||| || | | ||| |||| ||||| | || ||||| ||||| |||| || |||| Sbjct 234892 CACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGA 234951 Query 107154 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 107213 | || ||||| || || ||| |||||||| || || | |||||| | |||||| Sbjct 234952 AACATGAAGACATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAG 235011 Query 107214 TGAACATACCTT-GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 107272 |||| ||| ||| |||||| | ||| |||| || |||||||| || || ||| Sbjct 235012 TGAA-ATATCTTAATGACATCAAATTGTAGGTCTTCAGCACAGAATCGATATCACTACCG 235070 Query 107273 TGGATGCCGATGGCCACACGCATAAACATGT 107303 ||||| || | ||||||||||||| || || Sbjct 235071 TGGATACCTAGCGCCACACGCATAACCAAGT 235101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080