Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=941477 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| ||| | || || || || || ||| ||| ||||| || ||| ||||| | | | Sbjct 629972 TTATCGGTAAGGGTTATTACGGTACGATTTTACCACCAGTTATTCAGAGAAACCTGTTGG 630031 Query 153265 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 153324 | | |||| ||||| || ||||| ||||||||||| |||| ||||| || || || Sbjct 630032 AAAGTCCTGAATGGTATACTTCTTATACTCCCTATCAGCCTGAAATATCACAAGGTAGGC 630091 Query 153325 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAA 153384 | ||||| |||| || | ||||| || | |||| | || || || || | || | Sbjct 630092 TTGAAGCGCTATTGAACTTTCAAACAGTCGTTTCAGATTTGACCGGTTTGCCCGTGGCCA 630151 Query 153385 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATT 153433 |||| || | || ||||| | |||||||| | ||||| |||||||| Sbjct 630152 ACGCCTCATTGTTGGATGAGGGTACTGCAGCTGGTGAAGCTATGCTATT 630200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||| | |||||| | || ||||| ||||| |||||||||||||| || ||||| | Sbjct 630556 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 630615 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 || |||| || ||||| || || || |||||||| ||| ||| ||| | ||| Sbjct 630616 GATAAGTTAAATAGAAAAATTCCAGGTAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 630675 Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947 || | || | | || || || || ||||||||||| || |||| | | || || ||| Sbjct 630676 AAAACGGCCTTGCGGTTGGCCCTCCAAACTAGAGAGCAACACATCAAGCGTGATAAGGCA 630735 Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || || || || || ||||| || || |||||||| Sbjct 630736 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 630774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212676917280