Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 1e-15 >seq13 Length=941477 Score = 98.7 bits (108), Expect = 1e-15 Identities = 313/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || | Sbjct 631420 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 631479 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || || || |||| | | ||| || | || || | | | || ||||| Sbjct 631480 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTCACCGTAACATATGT 631539 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || |||||||| || ||||| || || || | ||||| || ||||| Sbjct 631540 TTAATCCCCGTTTCCGCACATGGTACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 631599 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| ||||| ||| | ||||| | || | || || ||| || Sbjct 631600 GTTGTTCCCGTCAACTGTTTACAAGATGGTTCTTTGGATCTTGTTGACTTAAAGACCAAG 631659 Query 159517 GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGT 159576 || | | || | ||||| | | ||||| || ||||| ||||| | ||| Sbjct 631660 GCTGAAAAGCATTCTAAAGAACTAGCGGCCGTAATGATCACCTATCCTTCTACTTACGGT 631719 Query 159577 GTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGTCAGGT 159635 |||||||| || |||| ||| | ||| | || || ||| |||||| || || Sbjct 631720 TTATTTGAACCAGGCATCCAACATGCTATCGAT-ATCGTGCATTCTTTTGGTGGACAAGT 631778 Query 159636 ATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGG 159695 ||| | |||||||| ||| | || || ||||| || ||| | ||| | || ||| Sbjct 631779 CTATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGCTAACTTCACCTGGAGATCTTGG 631838 Query 159696 TGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGG 159755 ||||||||| || ||| | || || || |||||||| | || || ||||| || || || Sbjct 631839 TGCAGATGTCTGCCATTTGAATTTGCACAAGACATTTTCCATCCCTCATGGTGGCGGTGG 631898 Query 159756 TCC 159758 ||| Sbjct 631899 TCC 631901 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | || || || || || || ||| ||||| || ||| ||||| | | | Sbjct 629972 TTATCGGTAAGGGTTATTACGGTACGATTTTACCACCAGTTATTCAGAGAAACCTGTTGG 630031 Query 157940 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 157999 | | |||| ||||| || ||||| ||||||||||| |||| ||||| || || || Sbjct 630032 AAAGTCCTGAATGGTATACTTCTTATACTCCCTATCAGCCTGAAATATCACAAGGTAGGC 630091 Query 158000 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAA 158059 | ||||| |||| || | ||||| || | |||| | || || | || | || | Sbjct 630092 TTGAAGCGCTATTGAACTTTCAAACAGTCGTTTCAGATTTGACCGGTTTGCCCGTGGCCA 630151 Query 158060 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTT 158108 |||| || | || ||||| | |||||||| | ||||| ||||| || Sbjct 630152 ACGCCTCATTGTTGGATGAGGGTACTGCAGCTGGTGAAGCTATGCTATT 630200 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | |||||| | || ||||| || || |||||||||||||| || ||||| | Sbjct 630556 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 630615 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || |||| || ||||| || || || |||||||| ||| ||| ||| || ||| Sbjct 630616 GATAAGTTAAATAGAAAAATTCCAGGTAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 630675 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || | || | | || || || || ||||||||||| || |||| | || || ||| Sbjct 630676 AAAACGGCCTTGCGGTTGGCCCTCCAAACTAGAGAGCAACACATCAAGCGTGATAAGGCA 630735 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || || || || || || ||||| || |||||||| Sbjct 630736 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 630774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120