Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 141 5e-29
seq9 120 2e-22
>seq5
Length=565208
Score = 141 bits (156), Expect = 5e-29
Identities = 315/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| ||| |||| |||| | ||||| || ||| || | ||| ||||
Sbjct 295889 TTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAA 295830
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | ||| ||| |||||||| || | ||||||||||| ||||| |||||| | |
Sbjct 295829 TCCATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 295770
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||||||||| | ||||||||||| | || | ||||| ||
Sbjct 295769 TATCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAG 295710
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | || || | ||| ||||| | ||| |
Sbjct 295709 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGG 295650
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | || |||||||| | | ||| | || || || || | |||||
Sbjct 295649 GAATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATAT 295590
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
|| ||| | ||| || |||||||| ||| ||||| ||||| ||| | |
Sbjct 295589 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 295530
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 295529 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 295470
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | |||||| || || || | ||||||||| | |||
Sbjct 295469 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 295417
>seq9
Length=443128
Score = 120 bits (132), Expect = 2e-22
Identities = 285/431 (66%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| | || |||||||||| ||| |||||||| || || | |||||||||||
Sbjct 234590 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAATAAATCCCTTGCACGAATTTCTTCTTT 234649
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || | ||| | | ||| | || || || ||||||| |||||||||||| || |
Sbjct 234650 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCGTGCCATGGTTCCAAGAA 234709
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
| ||||| ||| ||| || || ||||| || || || | ||||| | ||
Sbjct 234710 AAGGGCAAAGGCACCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 234769
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
|||||| | ||| |||| || ||| ||||| ||||| || | || | ||
Sbjct 234770 GAAAACACGAATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGA 234829
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
||||| || | || | || | ||||| ||| | ||||| || || |||||
Sbjct 234830 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCAT 234889
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||||| ||| | ||||| |||| |||| || ||| | ||||| | | ||
Sbjct 234890 AGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAG 234949
Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352
||||| ||||| | ||| | || | || || | |||||||| || || | ||| ||
Sbjct 234950 GAAACATGAAGACATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTG 235009
Query 26353 AGTATAATATC 26363
||| ||||||
Sbjct 235010 AGTGAAATATC 235020
Score = 95.1 bits (104), Expect = 6e-15
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
||||||||| | |||||| |||||||| |||| ||| | ||||||||||| || || ||
Sbjct 233726 GTTTGAAGTCACTGGTTCGAAACATTCGTTATATCCAAGAATTTGAGAAGTTGAGGCAGT 233785
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| || ||| | || ||||| || |||| ||| ||||| || | | ||||
Sbjct 233786 TGGCATTGGCGCCATTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAA 233845
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 233846 GGTTTCCCAATC 233857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039947573275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |