Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=941477 Score = 107 bits (118), Expect = 2e-18 Identities = 315/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Minus Query 138204 GGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCT 138263 ||||| || || ||||| || || | |||||||| || ||||| | ||| || |||||| Sbjct 631901 GGACCACCGCCACCATGAGGGATGGAAAATGTCTTGTGCAAATTCAAATGGCAGACATCT 631842 Query 138264 GCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGA 138323 |||||| || | ||| | ||| || ||||| || || | ||| |||||||| | | Sbjct 631841 GCACCAAGATCTCCAGGTGAAGTTAGCCCAACCTGCGCGTTCATATTAGCACCATCCAAA 631782 Query 138324 TATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAA 138382 || || || |||||| ||| ||||| | ||| | ||| |||| || |||||| Sbjct 631781 TAGACTTGTCCACCAAAAGAATGCACGAT-ATCGATAGCATGTTGGATGCCTGGTTCAAA 631723 Query 138383 TACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTTCAAATGTATTCATGAT 138442 || ||| | ||| || ||||| || ||||| | | ||||| | || | | Sbjct 631722 TAAACCGTAAGTAGAAGGATAGGTGATCATTACGGCCGCTAGTTCTTTAGAATGCTTTTC 631663 Query 138443 TGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTAC 138502 || || ||| || || | || | ||||| | ||| ||||| || Sbjct 631662 AGCCTTGGTCTTTAAGTCAACAAGATCCAAAGAACCATCTTGTAAACAGTTGACGGGAAC 631603 Query 138503 AACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTAT 138562 |||||||| || |||||| | ||| ||| ||||| || |||||||| || | || || Sbjct 631602 AACTTTCAAACCCGCCATGGCAGCAGAAGCTGGATTTGTACCATGTGCGGAAACGGGGAT 631543 Query 138563 CAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAG 138622 | ||||| || | | | || || | || || | | |||| || || Sbjct 631542 TAAACATATGTTACGGTGACTTTCACCCTTGCTTTCCAAGTAAGATCTGATTACTCTCAA 631483 Query 138623 TCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGT 138682 || | || ||||| |||| |||| ||||||||||| || ||| ||| |||||||| Sbjct 631482 ACCGGTGTATTCACCTTGTGCACCTGAATTAGGTTGTAAAGAAATACCATCGAAACCTGT 631423 Query 138683 GAT 138685 || Sbjct 631422 AAT 631420 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139854 AACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGT 139913 || ||||| || || | |||||||| | ||||| || | || ||||| || | || Sbjct 630200 AATAGCATAGCTTCACCAGCTGCAGTACCCTCATCCAACAATGAGGCGTTGGCCACGGGC 630141 Query 139914 AATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGA 139973 || || || | |||| | || ||||| | || |||| ||||| | || || || Sbjct 630140 AAACCGGTCAAATCTGAAACGACTGTTTGAAAGTTCAATAGCGCTTCAAGCCTACCTTGT 630081 Query 139974 GATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTT 140033 ||||| |||| ||||||||||| ||||| || ||||| |||| | || | | |||| Sbjct 630080 GATATTTCAGGCTGATAGGGAGTATAAGAAGTATACCATTCAGGACTTTCCAACAGGTTT 630021 Query 140034 CGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082 | ||| || ||||| ||| ||| || || || || || | ||| |||| Sbjct 630020 CTCTGAATAACTGGTGGTAAAATCGTACCGTAATAACCCTTACCGATAA 629972 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || || || || || ||||| || || | | || || ||||||||| Sbjct 630764 AGAGCTTGAGCGGTACAAATATTTGAAGTTGCCTTATCACGCTTGATGTGTTGCTCTCTA 630705 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430 ||||| || || || | | || | || ||| || ||| ||| ||| |||||| Sbjct 630704 GTTTGGAGGGCCAACCGCAAGGCCGTTTTCCCTAAGCGGTCTTTAGACACACCGACAATT 630645 Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490 || || || || ||||| || |||| || | ||||| || |||||||||||||| Sbjct 630644 CTACCTGGAATTTTTCTATTTAACTTATCAATGACAGCAAAAAAGGCAGCATGAGGACCA 630585 Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| || | |||||| | ||| Sbjct 630584 CCATAACCCATTGGGACACCAAATCGTTG 630556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840