Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 340 2e-88 seq9 244 1e-59 >seq5 Length=565208 Score = 340 bits (376), Expect = 2e-88 Identities = 905/1368 (66%), Gaps = 36/1368 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| |||||| || | | | || ||||| || Sbjct 295343 ATGAGAGTCGCACTGGGCATCCACGGCAGAGACATCGAAGCGGCTCTAGAAACATATAAC 295402 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 ||||| | || || || | ||| || | ||||| | || ||||||||||| || Sbjct 295403 TTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCC 295461 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | |||||| ||||||||||| ||| | ||||| Sbjct 295462 AAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTAT 295521 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | ||| | | || ||||| || || || ||||| |||||||| | || Sbjct 295522 TTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 295581 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| || | | | | | ||| ||| || ||||| ||| || | || Sbjct 295582 TATCCATAATATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACCTCTAACGG 295641 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | ||||| ||| |||| || ||||| ||| || || ||||| | || | | || Sbjct 295642 GTTAATTCCCATGATTCGTGTTTTTAATAACACCGCCCGTTATGTCGACCAGG-GTGGTA 295700 Query 75586 TCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| || || | || | ||| |||||||||||||||| ||||| | || | Sbjct 295701 ACAAAAGACCTGGCGCCTTTGCCCTGTACCTGGAACCATGGCATGCTGATATTTTTGATT 295760 Query 75642 TCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCAT 75701 | |||| | || ||||| ||| | ||||| ||| |||||| | ||| | Sbjct 295761 TTATTGATATCAGAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTG 295820 Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761 | || |||||||| || |||||||||||||| ||||| ||| ||| ||| || | | Sbjct 295821 CTCTATGGATTCCTGATCTTTTCATGAAGCGTGTTGAAGAGAATGGGACTTGGACTTTGT 295880 Query 75762 TCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTC 75820 ||| |||| ||| || || ||||| |||| || || ||||||||||| || Sbjct 295881 TCTCTCCA-ACAGCCGCTCCTGGTCTAAGCGACTGTTATGGCGACGAGTTTGAAGCTCTA 295939 Query 75821 TACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TG 75879 || || || ||| | || ||| | | || | | | || | | | || || Sbjct 295940 TATACCCGCTACGAAAAAGAAGGTCGTGGTAAGACCATTA----AGGCTCAAAAATTATG 295995 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || |||| || || || || ||||| | | | |||| |||||||| Sbjct 295996 GTATTCCATTTTGGAAGCACAAACTGAAACGGGTACACCTTTTGTCGTTTATAAGGATGC 296055 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 ||| |||| ||| ||||||||| || || || |||||| ||||| | ||| Sbjct 296056 TTGCAACAGAAAGTCTAACCAAAAAAACTTAGGTGTTATCAAGTCATCAAACTTATGCTG 296115 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | |||||| ||| | ||| || || |||||||| || ||||| || | || Sbjct 296116 TGAAATTGTTGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCTGTTGC 296175 Query 76060 CCTTCCAAAGTATGTCAATGAA------GAGACTCGC---ACTTTTGATTA-----TGAA 76105 | | ||| | || ||| |||| ||| || |||| | || | || Sbjct 296176 CTTGCCA--GCAT-TCATTGAAACGTCAGAGGACGGCCAAACTTCTACATACAACTTCAA 296232 Query 76106 AAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 ||| || || ||||| | || ||||||| ||| ||||| |||| ||||| | || Sbjct 296233 AAAATTACACGAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAA 296292 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| || || |||||| |||| ||||| |||| |||||| Sbjct 296293 TTACTACCCTGTTGAAGAAGCGAAAAGATCCAATATGAGACATAGACCAATTGCTTTGGG 296352 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 |||||||||| | || || || || ||| || | | |||||||| || || || Sbjct 296353 TGTTCAAGGTTTGGCTGACACTTTCATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGC 296412 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | ||| | ||||||||||| || ||||| || || |||| || ||| Sbjct 296413 CCGTTTACTAAATATCCAAATCTTTGAAACAATTTATCATGCCTCTATGGAAGCTTCTTG 296472 Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404 |||| | ||| || | || | || || || || | |||||||| || || ||||| Sbjct 296473 TGAACTAGCTCAAAAGGACGGACCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGG 296532 Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCT 76464 | |||||||| ||||||||||| || || | || | || |||||| | | Sbjct 296533 TATACTTCAGTTCGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGATACTTT 296592 Query 76465 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 76522 | |||| ||| | || | ||| || | ||| ||||| |||||||||||||| Sbjct 296593 GAGGGAAGATGTCATGAAGCATGGTATTAGAAAC--TCTTTGACCATGGCACCAATGCCT 296650 Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| | ||||| |||||| |||||||||| ||||||||| Sbjct 296651 ACTGCATCCACGTCCCAAATATTGGGTTATAATGAATGTTTTGAACCA 296698 >seq9 Length=443128 Score = 244 bits (270), Expect = 1e-59 Identities = 915/1409 (65%), Gaps = 52/1409 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || || | ||||| || || | || |||||||| || || |||||||| Sbjct 235108 CCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGATTCTGTG 235049 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | || Sbjct 235048 CTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 234990 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || |||||||| ||| || || ||||| || ||||| || |||| ||||| || Sbjct 234989 TAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 234930 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| || | ||||| |||| ||| | | || ||||| || || ||| || || Sbjct 234929 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 234870 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||| |||| | || || | | | | ||| ||| ||| || || || Sbjct 234869 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 234810 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| ||| |||| | ||||| ||| |||| || || ||| || || || ||||| Sbjct 234809 CGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 234750 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | || | | ||||||||||||||| Sbjct 234749 GGACCAAGGAGG---TAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAACCATGGCA 234693 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || || | || | || | ||| ||| | ||||| ||| Sbjct 234692 CGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAATTCGTGC 234633 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 || ||| | || | | ||||||||||| |||||||| ||||| || ||| | |||| Sbjct 234632 AAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGGA 234573 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||||| ||| || | || | ||| || |||||| | || | |||||| Sbjct 234572 TGGTCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTGA 234513 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 || ||||||| || || || || ||| ||| ||| | | || | | | | Sbjct 234512 CGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTGGTAAAACCATTAAA-- 234455 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 ||| | | ||| ||| | || ||| | || |||| || || || || ||||| | | Sbjct 234454 -GCC-CAAAAGTTATGGTATGCCATTTTACAAGCACAAACAGAAACAGGTACACCTTTCA 234397 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 || |||||||||| || ||||||| |||| |||||| |||| ||||| || || || Sbjct 234396 TGGTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTACCATTAAAT 234337 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 || || | || ||||| | ||||| | ||||| || || ||||| | Sbjct 234336 CATCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGCCGTTTGTA 234277 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAGAG------ACTCGCA 76091 || | || || || ||||| ||| | |||| | |||||| ||| | Sbjct 234276 ATCTAGCCTCTATTGCCCTCCCAGCATTTGTCGAGATGTCTGAAGATGGTAAAACTGCAA 234217 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 || | ||| || | | |||||||| | || | ||||| | || | ||| ||| Sbjct 234216 GTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTCATTACCCATAACTTGAACAGAG 234157 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| ||| | |||| |||||| ||| || |||| || |||||| | || |||| Sbjct 234156 TCATCGACCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAGGCATAGAC 234097 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTT 76270 |||||| ||||||||||||||||| || ||| | ||| || ||| |||| | ||| Sbjct 234096 CTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTAC-CTTTT 234038 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || ||||| ||||| | |||| | || || |||||||| ||||| || | Sbjct 234037 GAATCAGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATTTATCATGCTACT 233978 Query 76331 CTGGAGGCGAGTTGTGAATTGG--CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || || || |||||||||| | |||| ||||| ||| || || || |||| Sbjct 233977 CTTGAAGCCTCCTGTGAATTGGCACAGAAG--GAAGGTAAGTATTCTACTTTCGAAGGTT 233920 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAA 76446 |||| || || |||| | || || ||||| |||| |||| | || ||| | | | Sbjct 233919 CTCCAGCCTCTAAAGGTATTCTACAATTTGACATGT-GGAATGCTAAGCCATTTGGT-AT 233862 Query 76447 CTACGACTGGGATGTTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTC 76502 | || ||||| || ||| || | || |||| | | || | | | ||| || Sbjct 233861 GTGGGATTGGGA-AACCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC--TC 233808 Query 76503 TTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAAT 76559 ||| ||||| ||||||||||| ||||| || | |||| |||||| | |||| |||| Sbjct 233807 TTTGACAATGGCGCCAATGCCAACTGCCTCAACTTCTCAAATTCTTGGAT-ATAACGAAT 233749 Query 76560 GCTTTGAACCATACACAACAAACATCTAC 76588 | || |||||| || ||||||| ||| Sbjct 233748 GTTTCGAACCAGTGACTTCAAACATGTAC 233720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960