Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq12 149 9e-31 seq11 129 9e-25 seq9 107 3e-18 >seq12 Length=1023116 Score = 149 bits (164), Expect = 9e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || ||||||| || || ||||| | || |||||| ||| Sbjct 60525 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 60466 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || ||||| |||||||| ||||| || |||||||| ||| Sbjct 60465 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 60406 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| |||||||||||| || |||||| ||||| ||||| || || ||| Sbjct 60405 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGTTATCCGACTACAAT 60346 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || || || || || || ||||| ||||| ||| Sbjct 60345 AT-TCAAAAGGAATCTACTCTCCACTTGGTCTTGAGATTGAGAGGTGGT 60298 Score = 141 bits (156), Expect = 1e-28 Identities = 179/243 (74%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || ||||||| || || || || | || || ||| ||| Sbjct 59841 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATAACCCTCGAGGTTGAATCGTCT 59782 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| |||||||| | || || || ||||| ||||| || |||||||| ||| Sbjct 59781 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAA 59722 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| |||||||||||| || |||||| |||||| ||||| || || ||| Sbjct 59721 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACGTTATCCGACTACAAT 59662 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGTAAAATTGAA 156061 || || ||| || | || || || | || ||||| || || || ||| |||||| Sbjct 59661 AT-TCAAAAGGAATCCACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGT----AATTGAT 59607 Query 156062 TAA 156064 ||| Sbjct 59606 TAA 59604 Score = 120 bits (132), Expect = 4e-22 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || || || || || || |||||||| ||||||| ||| | Sbjct 470032 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 470091 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || || || ||||| || ||||| || || || || Sbjct 470092 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 470151 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| ||||||| | || || || Sbjct 470152 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTAC 470211 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || || || ||||| ||||| |||| Sbjct 470212 A--ACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTG 470263 >seq11 Length=690553 Score = 129 bits (142), Expect = 9e-25 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 |||| || |||||||| || || || || |||||||| ||| |||||| | ||| | Sbjct 639678 TTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGACACCATTGACA 639619 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 | || || || || ||||| || ||||| || || || || |||||||||||||| | Sbjct 639618 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCCGACCAACAAAGATTGATCT 639559 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013 |||||||||||| | ||||| |||||||||||| || || || || ||||| || Sbjct 639558 TTGCCGGTAAGCAATTGGAAGACGGCAGAACTTTATCTGACTACAACAT--CCAAAAGGA 639501 Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || | ||||| || || ||||||||||| ||| Sbjct 639500 ATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 639464 >seq9 Length=443128 Score = 107 bits (118), Expect = 3e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || || ||||| ||| |||||| | |||| Sbjct 63084 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 63143 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 || || || || || ||||| || ||||| || || || || |||||||||||| Sbjct 63144 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 63203 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | ||| |||||||| | ||||| ||||| || || || || || || ||| Sbjct 63204 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 63263 Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || ||||| || ||||| ||||| ||| Sbjct 63264 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGT 63302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871844477200