Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq9 152 2e-31
seq5 147 6e-30
seq13 113 1e-19
seq4 104 7e-17
seq15 93.3 1e-13
>seq9
Length=443128
Score = 152 bits (168), Expect = 2e-31
Identities = 222/311 (71%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| || || || || ||||| |||||||| || ||||| |||| | ||||||||| |
Sbjct 234735 TTACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAAC 234794
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
||||| ||||| || ||||| ||| |||| ||||| | || || | || | ||||
Sbjct 234795 CCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 234854
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| || ||||| ||| ||||| || | ||||| ||
Sbjct 234855 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 234914
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|||||||||||||| ||||| | ||| | | ||| | || ||| | ||| || ||
Sbjct 234915 ATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGGTGT 234974
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358
|| || |||||||| |||| || || | || ||| | ||||| |||| | ||||| |
Sbjct 234975 GGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAAT-GACATCAA 235033
Query 156359 ATCGTATGTCT 156369
|| ||| ||||
Sbjct 235034 ATTGTAGGTCT 235044
>seq5
Length=565208
Score = 147 bits (162), Expect = 6e-30
Identities = 501/775 (65%), Gaps = 12/775 (2%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644
||| ||| |||| ||||| || ||||| || | || |||| || || ||||| ||
Sbjct 296174 CAACAGAAGCCAAGTTACAAACAGCAGTTTCGTC--CGGAGCTGAGTACTCAACAATTTC 296117
Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704
|||||| | ||| || |||||| ||||| || || |||||||| || ||||| ||
Sbjct 296116 ACAGCATAAGTTTGATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCA 296057
Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764
||||||||| || | | | || || || || || | ||||| |||| |||
Sbjct 296056 AGCATCCTTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATA 295997
Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATA 155824
||| | | | || ||||| ||| | ||||| || || ||||
Sbjct 295996 CCATAATTTTTGAGCCTTAATGGTCTTACCA---CGACCTTCTTTTTCGTAGCGGGTATA 295940
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAAA 155883
|| | | | || || || ||||| || || || ||||| || | | || | | |
Sbjct 295939 TAGAGCTTCAAACTCGTCGCCATAACAGTCGCTTAGACCAGGAGCGGCTGTTGGAG-AGA 295881
Query 155884 ACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943
||| | |||| | ||| | ||||||| ||| || | |||| ||| | ||
Sbjct 295880 ACAAAGTCCAAGTCCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAG 295821
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGA 156003
|| || | || ||||| || || | ||||| ||||| | | || | |
Sbjct 295820 CAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAA 295761
Query 156004 ATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG- 156062
| || |||||||| ||| ||| ||||| |||| ||||| ||| || |||
Sbjct 295760 AATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGT 295701
Query 156063 --CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATAC 156120
|||||||| || ||||| || || || ||||| || |||| | ||| ||||| | |
Sbjct 295700 TACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACC 295641
Query 156121 CATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATAT 156180
| || || || || || || || ||| | ||||||| ||| |||| |||||| ||||
Sbjct 295640 CGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATAT 295581
Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240
|||| ||||||||||| | ||| ||||| ||| ||||| || | ||| | | |||
Sbjct 295580 GTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAA 295521
Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300
|||| || ||||| || || | ||| | | | | || || | ||||||| ||
Sbjct 295520 TACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTG 295461
Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
| || ||||| || || | || || | |||||| |||| || || ||||||
Sbjct 295460 GAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACAT 295406
>seq13
Length=941477
Score = 113 bits (124), Expect = 1e-19
Identities = 209/306 (68%), Gaps = 3/306 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 431024 CCTGTCAAATCTACCAGGTCTTAGTAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 431083
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| | |||| | | |||| |||||||| | ||| || |||||
Sbjct 431084 AGCTAAGACAACAACATGGTCGGCTGGAGTAAAACCATCCATTTCTACTAACATCTGATT 431143
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || ||||| || | |||| ||| |||| | ||| |||
Sbjct 431144 CAGCGTATTCTCTCTCTCATCGTTGGCACCTGAAAAATTACCCTTTTG---CCTAGCTTT 431200
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | ||| |||||||||||||| || | | | || | |||| ||| ||| |
Sbjct 431201 CCCTATAGCGTCAATTTCGTCAATAAACACAATCGAAGGTGCGTTTTCTCTTGCAGTCTT 431260
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||| || |||||||| | | || |||| ||||||| |||||||||||||||| ||| |
Sbjct 431261 AAACAAATCTCTTACTCTTGCAGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 431320
Query 289149 GGATAC 289154
||| ||
Sbjct 431321 GGAAAC 431326
>seq4
Length=1477988
Score = 104 bits (114), Expect = 7e-17
Identities = 135/186 (73%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826
||| |||| ||| | || ||| | || |||||| | | | || |||||| | |
Sbjct 208380 TAAGTAAACAGTCAAAGAAGGAGTTTTCATGTTTTTGGCCACATTCAAAATTTCCTTTAA 208439
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||||||||||||| || || || |||||| |||||||||||||| ||||| |||||
Sbjct 208440 ACGGGGAACACCAGAAGTAACTTT---CTTGGAAGCAACACCAGCAAAATGGAAGGTATT 208496
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946
|| || | ||| |||| ||| |||||||| ||| || || | | ||||||||||||
Sbjct 208497 AAGTGTCATTTGTGTAGCTGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 208556
Query 301947 TCCTGG 301952
|| ||
Sbjct 208557 ACCAGG 208562
Score = 104 bits (114), Expect = 7e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| | ||| || ||||| | | || | |||||||||
Sbjct 209167 TTTCTTGTGGTGTTATCGTAATGGACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 209226
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || |||||| || || ||||| || ||||| |||||||||||
Sbjct 209227 TGAATATAACCTGTTTCAGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 209286
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| || |||||||| | |||||
Sbjct 209287 ATTGCGTGGAAGAAAAACTCTT 209308
>seq15
Length=1078405
Score = 93.3 bits (102), Expect = 1e-13
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| | ||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 707592 AGCACCATAGGCAATTACACAATCTCTTTCCATTTCACCCAACCTCAGACCACCATCTCT 707651
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
|| ||||||| | |||||| || ||||||| |||||||| |||| | |
Sbjct 707652 GGATCTACCCTCAGTAGGTTGACGTGTCAAAACAGCCCTTGGACCACGAGCTCTTGCGTG 707711
Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417
|| |||||| ||||||||||||||
Sbjct 707712 CATCTTATCTAAAACCATATGCTTCA 707737
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| |||||||| || ||||| ||||| | || || |
Sbjct 596563 TGGGCAACAGTCATACGAGATGGAATAGCGTGAGGATTAATGATTAAATCCGGAACAATA 596622
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || |||||||| || || | ||| || | |||||||| ||||||||
Sbjct 596623 CCTTCTGCTGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 596681
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||| || || ||||||||
Sbjct 596682 ACCGTGACGAGAGGCAAATTTGTCACCAAT 596711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817279419729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |