Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 2e-21
>seq12
Length=1023116
Score = 116 bits (128), Expect = 2e-21
Identities = 168/236 (71%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 34743 AATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTA 34801
||||| || || ||||||||||| | ||||||||| | ||| ||||| ||||| ||
Sbjct 59606 AATCAATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTG 59665
Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861
||||| |||| | | |||| ||||||||||| ||||| || |||| || || |||
Sbjct 59666 TAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGG 59725
Query 34862 TCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTG 34921
||| | || | || ||||| || | || || || ||| | || | |||
Sbjct 59726 TCTGGAGGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAC 59785
Query 34922 GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || || || | |||||||||||| || || || ||||| ||||||||||||||
Sbjct 59786 GATTCAACCTCGAGGGTTATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 59841
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| |||| ||||| ||| | || ||||| ||||| || ||||| |||
Sbjct 60299 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 60358
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | | |||| ||||||||||| ||||| || |||| || || |||||| | ||
Sbjct 60359 AACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 60418
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | ||||| |||||| | |||| || | |||||
Sbjct 60419 ATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACC 60478
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || || || ||||| ||||||||||||||
Sbjct 60479 TCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| || ||||| ||||| || | | | | | || ||||||||||| || || |||
Sbjct 59879 TCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAG 59938
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || || || ||| | || | || || ||||| | |||||| ||||||
Sbjct 59939 ATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTA 59998
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| | || || || | ||||||||| || ||||| || ||||| ||
Sbjct 59999 TCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACG 60058
Query 34967 AAGATCTGCAT 34977
|| ||||||||
Sbjct 60059 AAAATCTGCAT 60069
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| || ||||| ||||| || | | | | | || ||||||||||| || || ||
Sbjct 60562 CTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 60621
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || ||||| ||| | || | || || ||||| | |||||| ||||||
Sbjct 60622 GATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTT 60681
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| | ||||| || | |||||||| || || || | ||||| ||
Sbjct 60682 ATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGAC 60741
Query 34966 AAAGATCTGCATGAT 34980
||| || ||||| ||
Sbjct 60742 AAAAATTTGCATAAT 60756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692732520523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |