Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9 194 3e-44
seq12 188 1e-42
seq15 84.2 4e-11
>seq9
Length=443128
Score = 194 bits (214), Expect = 3e-44
Identities = 175/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||| | ||| |||||||| || || || || ||||
Sbjct 63303 TACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 63244
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 63243 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 63184
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 63183 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 63124
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 63123 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63084
>seq12
Length=1023116
Score = 188 bits (208), Expect = 1e-42
Identities = 179/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || ||||| || || |
Sbjct 60297 TACCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGG 60356
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| ||||||| ||||| ||||| || || ||||| || | ||| ||||| |||||||
Sbjct 60357 ATAACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAG 60416
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||||||||| || | || || || |||||||| || || ||| |
Sbjct 60417 GAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGA 60476
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || ||||| || |||| |||||| ||||| ||||||||
Sbjct 60477 CCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 179 bits (198), Expect = 7e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | ||| ||||| |||| |||||||||||||| || ||||||||||
Sbjct 60069 TACCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAG 60128
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||||||||||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct 60129 ACAGTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTG 60188
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || || || ||||| ||||| ||| || || ||||| || || || ||| |
Sbjct 60189 GGATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 60248
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| || || || || | || || ||||| || |||||
Sbjct 60249 CCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| ||||||||| || || || || || |||||
Sbjct 470262 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 470203
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
||| |||| || ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 470202 CAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 470143
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 470142 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 470083
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || ||||| || || || ||||| || || || |||||
Sbjct 470082 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 470035
Score = 158 bits (174), Expect = 2e-33
Identities = 180/239 (75%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 82573 TTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632
|| |||| |||| || ||||| | | || | ||| ||||| ||||| || || ||||
Sbjct 59604 TTAATCAATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATAT 59663
Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692
| || || |||| |||| || ||||| ||||| || || ||||| || | ||| ||||
Sbjct 59664 TGTAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTT 59723
Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCA 82751
| |||||||| || ||||||||||| |||||| ||||| || || || ||||| || |||
Sbjct 59724 GGTCTGGAGGAATACCTTCCTTATCCTGAATC-TTGCTCTTCACGTTGTCAATAGTGTCA 59782
Query 82752 TTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||| || || | ||||| ||||| || |||| |||||| ||||| ||||||||
Sbjct 59783 GACGATTCAACCTCGAGGGTTATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 59841
Score = 158 bits (174), Expect = 2e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661
|| || || | ||| || || || || || || || || || | |||||||||||||
Sbjct 60545 ACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCC 60604
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
||||| || ||||||||||| | ||| || ||||||||||| || ||||| || || |||
Sbjct 60605 AGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTCCTGA 60664
Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781
|| |||| || || || ||||| |||||| || ||| |||||||| ||||| || ||
Sbjct 60665 ATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTA 60724
Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
|| ||||| ||||| ||||| || ||||| ||
Sbjct 60725 CCGGTCAAAGTCTTGACAAAAATTTGCATAAT 60756
Score = 143 bits (158), Expect = 5e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661
|| || || | ||||||||| || || || || || || || | |||||||||||||
Sbjct 59861 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCC 59920
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
||||| || ||||||||||| | ||| |||||||||||||| || ||||| || || |||
Sbjct 59921 AGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTGA 59980
Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781
|| |||| || || || ||||| || ||| | ||| || || | ||||| || ||
Sbjct 59981 ATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTTTTA 60040
Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||| ||||| || || ||||||||
Sbjct 60041 CCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
>seq15
Length=1078405
Score = 84.2 bits (92), Expect = 4e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 143946 ACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAA 144005
|||||| |||| |||||| | ||| || || | | || || ||||| |||||||||
Sbjct 418949 ACAGATCAAGACGAGTGGGATGTATGGCAACAACGAACTGACCCTGTCTTACATATAGAA 418890
Query 144006 CTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAA 144065
|| | | ||||||||| | | || | ||||| || || ||||| || || || ||
Sbjct 418889 CTACGTCGTTGGGCTGATATACTGGTTGTCGCGCCATTGACCGCAAACACATTGGCCAAG 418830
Query 144066 ATAGCCAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGAT 144119
|| ||| ||| |||||||||| || | ||| | || ||||||| ||| ||
Sbjct 418829 ATTGCCCTTGGCTTATGCGATAACTTTTTGACAAGTGTAATAAGAGCATGGAAT 418776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826986145763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |