Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 seq12 82.4 7e-11 >seq9 Length=443128 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 ||| |||||||||||||| || ||||| || ||||| |||| ||||| ||||| || Sbjct 234260 GGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATACTCGACGATTTC 234319 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 |||| ||| |||| || |||| ||||| ||| || |||| ||||| || Sbjct 234320 ACAACACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTGTTACA 234379 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||||||||| | |||| | ||| || ||||| Sbjct 234380 TGCGTCCTTGTAAACCATGAAAGGTGTACCTGTTTC 234415 >seq12 Length=1023116 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||||| || || || || || || ||||| ||| || || ||| || || Sbjct 59864 AAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGT 59923 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | | ||| || || ||||| || ||||| ||||| ||| Sbjct 59924 TGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCC-TGAAT 59982 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||||| ||||| | |||| ||||| | | || || |||| ||| | |||||| || Sbjct 59983 TTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTTTTACC 60042 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||||||||| Sbjct 60043 CGTCAGTGTCTTAACGAAAATCTGCAT 60069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420697273080