Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9 158 3e-33
seq5 156 1e-32
seq4 132 1e-25
>seq9
Length=443128
Score = 158 bits (174), Expect = 3e-33
Identities = 406/614 (66%), Gaps = 21/614 (3%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||| | || ||| | ||||| || | | || || || |
Sbjct 235174 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCA 235115
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || || ||| || || | ||||| ||| | ||||| || || |||||| |
Sbjct 235114 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGAT 235055
Query 110424 GCTGTTATTGAATGTTA-----TGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477
|||| | | || |||||| |||||| | | | | ||| ||| |
Sbjct 235054 TCTGTGCTGAAGACCTACAATTTGATGTCATTAAG-----ATATTTC-ACTCACGCTTCC 235001
Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| ||| |||||||||| || ||| ||| || |||| || || || | |
Sbjct 235000 CCAACCTTATTTAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCC 234941
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || ||||| ||||||||||||||||||||| || | |||||| |||| | |||||
Sbjct 234940 ATGAAGGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCC 234881
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | | || || ||||| |||| || | | || || || | ||| | |||||
Sbjct 234880 AAGACTGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATC 234821
Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717
|| | || ||| |||||| ||| | |||| ||| | | || |||||| | |||
Sbjct 234820 GCCGGTACCAACGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACT 234761
Query 110718 GCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774
|| |||||| | ||||| ||| |||||| ||| | ||||| | | | |||
Sbjct 234760 GCTCGTTATGTGGACCAAGGAGGTAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAA 234701
Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834
|| ||||| ||||||| || || || | || || | |||| || || | |||||
Sbjct 234700 CCATGGCACGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGG---TAAAGAA 234644
Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891
||| | ||| | |||||||| ||| |||||||| | || | || |||||||||
Sbjct 234643 GAAATTCGTGCAAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGT 234584
Query 110892 GTTCAAGAAAATGG 110905
|||||||| ||||
Sbjct 234583 GTTCAAGAGGATGG 234570
>seq5
Length=565208
Score = 156 bits (172), Expect = 1e-32
Identities = 560/865 (65%), Gaps = 18/865 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||||||||||||| | |||||| |||||||||| | |||| || | |
Sbjct 295262 TATTTTGGTTTCAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 295321
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| |||||| | || | | || || | || || || || || || ||
Sbjct 295322 GAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCACGGCAGAGACATCGAA 295381
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|| | | | ||| ||| | || | | ||| | || |||||| |||| ||
Sbjct 295382 GCGGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACT 295441
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| ||||| || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 295442 TTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTCGCCATGAA 295500
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || |||||||| || || | |||||| |||| | ||||| ||||
Sbjct 295501 GGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAAC 295560
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| ||||||| |||| || | | || ||
Sbjct 295561 TGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTCAACTGGTTCTTACATTGCTGG 295620
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| | || | || | |||| ||| | | || || || |||| ||
Sbjct 295621 TACAAACGGTACCTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAACACCGCCCG 295680
Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| | || |||| | ||||| | || || ||||| ||
Sbjct 295681 TTATGTCGACCAGGGTGGTAACAAAAGACCTGGCGCCTTTGCCCTGTACCTGGAACCATG 295740
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||| ||||| || | || | | || || || || | ||||| |||
Sbjct 295741 GCATGCTGATATTTTTGATTTTATTGATATCAGAAAGAACCACGG---TAAAGAAGAAAT 295797
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| ||| ||| | |||||| | ||| | |||||||| |||||| |
Sbjct 295798 TCGTGCAAGAGATTTGTTTCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTTGA 295857
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCT-CATCGTTCTCCTGGTCTATCTGA-TGTA 110954
||| ||||| | ||| || | | | ||| || | ||||||||||| || |||
Sbjct 295858 AGAGAATGGGACTTGGACTTTGTTCTCTCCAACAGCCG-CTCCTGGTCTAAGCGACTGT- 295915
Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014
||||| | |||||||||| || || || ||||||||||| | | ||
Sbjct 295916 TATGGCGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGG---TCGTGGTAAG 295972
Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
||| |||||| || | |||| || | ||| ||||| |||||| || ||
Sbjct 295973 ACCATTAAGGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGGGTACA 296032
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|||| | | | ||||| ||| | || | || ||||| |||| || |||||
Sbjct 296033 CCTTTTGTCGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTAGGTGTT 296092
Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 296093 ATCAAGTCATCAAACTTATGCTGTG 296117
>seq4
Length=1477988
Score = 132 bits (146), Expect = 1e-25
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| |||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 210428 GATAATGATCCAGTTCTGTTCAATCGTCAACCCTCATTGCATAAAATGTCTATGATGGCT 210369
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|| | ||| ||||| | || | ||| |||||| |||| ||| || || | | ||
Sbjct 210368 CACAGAGTGAAAGT-TATTCCGTATTCTACATTTAGATTGAATTTATCTGTTACATCTCC 210310
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
|| ||||| ||||| || || || ||||||||| | ||||| ||||| || ||| ||
Sbjct 210309 ATACAATGCCGATTTCGACGGTGACGAAATGAATCTTCATGTTCCTCAGTCTGAGGAAAC 210250
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | ||| | || || ||||| ||||
Sbjct 210249 AAGGGCAGAACTGTCCCAATTATGTGCTGT 210220
Score = 91.5 bits (100), Expect = 3e-13
Identities = 123/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | || || |
Sbjct 210854 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGC-T 210798
Query 304944 CT-CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGT 305002
|| |||| || || | || |||| |||| | || | || ||||||||||||
Sbjct 210797 CTACAAAAGTCCGGTCGTCCCGTAAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGT 210738
Query 305003 CGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAG 305049
||||| |||||||| ||||||| || |||||||||||| |||||
Sbjct 210737 CGTATCAGAGGTAATTTAATGGGTAAGCGTGTTGATTTTTCAGCAAG 210691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |