Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq12 129 4e-25
seq9 96.9 2e-15
>seq12
Length=1023116
Score = 129 bits (142), Expect = 4e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | |||||||||||||| |||| ||| ||||| |||||||| |||||
Sbjct 60526 ACCACCTCTTAGTCTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 60585
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||| ||| || || ||||| ||||| | |||||||||| | ||
Sbjct 60586 CAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGG 60645
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| |||||| || | || | || | || || ||||| |
Sbjct 60646 AATACCTTCTTTGTCCTGAATTTT-TGACTTGACGTTATCAATAGTATCAGAAGATTCGA 60704
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || || || || ||||| || ||||||
Sbjct 60705 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATA 60754
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | | |||||||||||||| ||| || ||||| |||||||| |||||
Sbjct 59842 ACCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 59901
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||| ||| || || ||||| ||||| | ||| |||||| | ||
Sbjct 59902 CAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGG 59961
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| |||||| || | || | || | ||||| ||||| |
Sbjct 59962 AATACCTTCTTTGTCCTGAATTTT-TGACTTGACGTTATCAATAGTGTCAGACGATTCAA 60020
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| || | || || || || |||||||||
Sbjct 60021 CCTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCATA 60070
Score = 114 bits (126), Expect = 8e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || ||||| || ||||| || ||||| |||||
Sbjct 60298 ACCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGA 60357
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || |||| ||| || |||||||||||||| | ||| || ||| | ||
Sbjct 60358 TAACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGG 60417
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| || || ||||||| | | || | ||| | |||||| ||||| |
Sbjct 60418 AATACCTTCCTTATCTTGAATTTTC-GACTTGACGTTGTCAATCGTGTCGGAAGATTCGA 60476
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || ||||| || | ||| || |||||||||||||||
Sbjct 60477 CCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 60526
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| ||||| | ||| |||| || |||||| || ||||| || ||||| |||||
Sbjct 59614 ACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGA 59673
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || |||| ||| || |||||||||||||| | ||| || ||| | ||
Sbjct 59674 TAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGG 59733
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| || || ||| || ||| || | ||| | ||||| ||||| |
Sbjct 59734 AATACCTTCCTTATCCTGAATCTTGCTCTTC-ACGTTGTCAATAGTGTCAGACGATTCAA 59792
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || ||||| || | ||| || |||||||||||||||
Sbjct 59793 CCTCGAGGGTTATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 59842
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | | ||| ||||| | || ||||| || ||||| ||||| ||
Sbjct 60070 ACCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGA 60129
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||| | |||| |||| ||| || || |||||||| | | || |||||| | ||
Sbjct 60130 CAGTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGG 60189
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| || || ||| || | ||| | |||||| ||||| |
Sbjct 60190 GATACCCTCTTTGTCTTGGATCTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 60248
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || |||||||| |||| ||||| ||||| || ||||||
Sbjct 60249 CCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCATA 60298
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| || | ||| || ||||| |||||||| || |
Sbjct 470263 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAG 470204
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || || | | || |||||||| || || ||||| ||||| | || || || | |
Sbjct 470203 ACAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 470144
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | ||||| |||||
Sbjct 470143 GGATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 470085
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| ||||| || || || || || |||||
Sbjct 470084 ACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 470035
>seq9
Length=443128
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || || || |||| |||| |||||||| |||||||| || ||
Sbjct 63302 ACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 63243
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||| ||||| | || || || | ||
Sbjct 63242 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 63183
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || || | |||| ||| | ||||| ||||| |
Sbjct 63182 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 63124
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 63123 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703931896640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |