Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 3e-22
seq9 89.7 5e-13
>seq12
Length=1023116
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| ||||| |||| || ||| | || || | || || ||| | |
Sbjct 60297 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 60238
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || || || ||||||||||| || || |||||
Sbjct 60237 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 60178
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||||| |||| | || || ||||| ||||| | ||||| |||| | |||| |
Sbjct 60177 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACACTGTCTG--ATTATA 60120
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| |||||||| || | ||||||||| | ||||||||||| ||
Sbjct 60119 ACATTCAGAAAGAATCTACGTTGCATTTAGTGCTGAGATTGAGAGGTGG 60071
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || | || || || | || || | || |||||| | |
Sbjct 60525 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 60466
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || |||||| ||||| || ||||| || || || ||
Sbjct 60465 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 60406
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | |||| | ||| || ||||| ||||||| ||||| | ||| ||||||
Sbjct 60405 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGTTATCCGACTACAAT 60346
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| ||||| || | || || || || ||||||||||| ||
Sbjct 60345 ATTCAAAAGGAATCTACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 60299
Score = 86.0 bits (94), Expect = 6e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || | || || || | || || |||| || ||| |
Sbjct 59841 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATAACCCTCGAGGTTGAATCGTCT 59782
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || || ||| ||||| || ||||| || || || ||
Sbjct 59781 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAA 59722
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | |||| | ||| || ||||| ||||||| |||| | ||| ||||||
Sbjct 59721 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACGTTATCCGACTACAAT 59662
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409
|||||||| |||||||| | || | || ||||| ||||| || || || ||||
Sbjct 59661 ATTCAAAAGGAATCCACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTAATTGAT 59607
>seq9
Length=443128
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| || || || || || || | ||||| | ||||| ||| | || |||||
Sbjct 63084 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 63143
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 63144 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 63203
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| |||||||
Sbjct 63204 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 63261
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||| | || ||||| || ||||||||||| ||
Sbjct 63262 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 63301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094305417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |