Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq10 143 2e-29
seq2 134 1e-26
>seq10
Length=743843
Score = 143 bits (158), Expect = 2e-29
Identities = 389/589 (66%), Gaps = 15/589 (3%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| |||| || ||||| || |||||| || || || | || || || ||
Sbjct 390861 TTTCCCTATCAAGTACCATGAAATCTGGCAAGCTTATAAGCGTGCCGAAGCCTCTTTCTG 390920
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAA--AACCA 43825
||| || |||||| |||||||| |||| || | |||||| | || ||| |
Sbjct 390921 GACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGATTGGAATAACAGAATGAACGA 390980
Query 43826 CAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGT 43884
|| || | | |||||| ||| ||| | || ||||| || || ||||| || ||
Sbjct 390981 AAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 391040
Query 43885 CAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944
|||||||| |||||| || | ||||||||| | ||||| ||| ||||
Sbjct 391041 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAGTTCCAGAGGCAAAGAGTTT 391100
Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004
||||| || ||||| || |||||||||||||| |||| ||| | |||| ||
Sbjct 391101 CTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACCTACTCCTTGTTGATCGA 391160
Query 44005 TACGTACATCAAAGA----TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAG 44060
||| |||||||| || || | | ||| || ||||| ||||| || | ||
Sbjct 391161 TACCTACATCAAGGACCCTAAGGAAAGTGAA--TTC--TTGTTCAATGCCATTCACACCA 391216
Query 44061 TACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATT 44117
| || | || | || || || ||||| || | |||||| | | | | | |
Sbjct 391217 TCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCT 391276
Query 44118 CTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGT 44177
||||| ||| |||| ||||| ||||| | | ||||| | ||||| || || || |
Sbjct 391277 TGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCGAAGGTGTCTTCTTCTCCGGTTCCT 391336
Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237
| || |||| || ||||| ||||| ||||| ||||||| || ||||| || || || |
Sbjct 391337 TCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGTTTGACCTTCTCTAACG 391396
Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
| || || | | || ||||| || || ||| ||||| ||||||||
Sbjct 391397 AATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGCATGCTTGTT 391445
>seq2
Length=835812
Score = 134 bits (148), Expect = 1e-26
Identities = 310/466 (67%), Gaps = 22/466 (5%)
Strand=Plus/Minus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
|| || || |||||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 410099 TACGGTCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 410040
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || || ||||||||||| || | ||| || || |||
Sbjct 410039 GCCAAAGAGCC---CAAAATCGTGAACGGTCCTGAAATTTTGAGTAAGTACGTTGGTTCT 409983
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| || |||||| | || |||||| || ||||||| |||| | || | |
Sbjct 409982 TCAGAGGAAAATATTCGTAATTTGTTCAAGGATGCTGAAGCAGAATATCGGGCCAAGGGT 409923
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || || || || || || || | |||||| |||| | | | ||||
Sbjct 409922 GAGG-----AATCCTCCTTACATATCATTATTTTCGATGAACTGGATTCTGTTTTCAAGC 409868
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | || ||| ||||| ||| || |||||| | |
Sbjct 409867 AGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGTAGTTAATCAATTATTAG 409808
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | ||| ||||||||||||| |||||||| ||||| || |
Sbjct 409807 CCAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGGTATGACCAACCGTA 409748
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
||| |||||||| || || | ||||| || ||| | || ||| | | | ||||||
Sbjct 409747 AGGATTTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 409688
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATAC 19811
| ||||| |||||| ||| | | ||||||| |||| || ||
Sbjct 409687 ATTTACCGGATGAAAAAGGAAGACTCCAAATTTTCGACATCCAGAC 409642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455917652085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |