Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
seq5 105 6e-18
seq11 84.2 2e-11
>seq12
Length=1023116
Score = 116 bits (128), Expect = 3e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076
||| || || | ||||| || |||| || | || || || |||||||||||||||||
Sbjct 59611 ATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTC 59670
Query 27077 -GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135
| | | ||| || | ||||| || || |||||||| |||| | | |||||| || |
Sbjct 59671 GGATAACGTTCTGC-CATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTG 59729
Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195
| || | ||| || ||||| |||||| | |||| | | || | |||||| | | ||
Sbjct 59730 GAGGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGACGATT 59789
Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| || || ||||| | || || ||||| || || |||||||| ||||||
Sbjct 59790 CAACCTCGAGGGTTATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 59842
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095
|| ||||||||||| ||||| || ||||| || ||||||||| || | | | |||||
Sbjct 59858 AACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 59917
Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155
|| || || ||||| || | || | | ||||||||| || || | ||| ||||| ||
Sbjct 59918 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCC 59977
Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215
|| || || | | | || | |||||| | | |||||| || || ||||| | |
Sbjct 59978 TGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTT 60037
Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||||| || || || || || ||||||
Sbjct 60038 TTACCCGTCAGTGTCTTAACGAAAATCTGCATA 60070
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | ||| | ||| ||||| || | ||||| || ||||||||||||||||| | |
Sbjct 60299 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 60358
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| | | ||||| || || |||||||| |||| | | |||||| || || ||
Sbjct 60359 AACGTT-CTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGG 60417
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || ||||| || || || | | | || | ||||| | | ||| ||
Sbjct 60418 AATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGAC 60477
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | || || ||||| || || |||||||| ||||||
Sbjct 60478 CTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 60526
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095
|| ||||||||||| || || || ||||| || ||||||||| || | | | |||||
Sbjct 60542 AACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 60601
Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155
|| || || ||||| || | || | | ||| ||||| || || | ||| ||||| ||
Sbjct 60602 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTCC 60661
Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215
|| || || | | | || | ||| || | | ||| ||||| | ||||| | |
Sbjct 60662 TGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTT 60721
Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || |||| ||| || ||||| |||||||||
Sbjct 60722 TTACCGGTCAAAGTCTTGACAAAAATTTGCATA 60754
>seq5
Length=565208
Score = 105 bits (116), Expect = 6e-18
Identities = 394/615 (64%), Gaps = 11/615 (2%)
Strand=Plus/Minus
Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695
|| |||| |||||| |||||||| || | ||| || | ||||| || |||| ||||
Sbjct 295866 CCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATCT 295807
Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCC 131755
|| || | |||||| |||| | ||| | | || | ||| || ||||| ||
Sbjct 295806 CTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCA 295747
Query 131756 GCATGCCAGGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGA 131809
|||||||| ||||||| |||| || | ||||| |||| ||||| || ||
Sbjct 295746 GCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTG---TTACCACCCTGG 295690
Query 131810 TTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTT 131869
| |||| ||| | |||| || | || || | |||||| || ||||| | | |
Sbjct 295689 TCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTA 295630
Query 131870 CCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATA 131929
|| || || | |||||| ||| | | | || || || | | || ||||||
Sbjct 295629 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATA 295570
Query 131930 CCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCAC 131988
|| || || || ||| || || | || |||| | | ||||| || ||||| || |
Sbjct 295569 CCACCAGCAGT-TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGAT 295511
Query 131989 GCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC 132048
|||| | ||| |||| || || |||||||||| || | | || || ||
Sbjct 295510 AGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGC 295451
Query 132049 TGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGATACGATTG 132108
|||||| || || ||| || ||||| |||| | ||| | ||| | ||
Sbjct 295450 ATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTC 295391
Query 132109 TATAGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATGTACATGTGTTG 132168
|| ||| | ||||| || | || ||| || |||||| | ||| | ||||||
Sbjct 295390 TAGAGCCGCTTCGATGTCTCTGCCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTG 295331
Query 132169 AATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATAACCGTTTTCCAAAGTTTTGAA 132228
|| |||||| || |||| |||| | | |||||| |||||||||||||||
Sbjct 295330 TGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAA 295271
Query 132229 ACCAAAATATTTGTA 132243
||||||||| ||||
Sbjct 295270 ACCAAAATAACTGTA 295256
>seq11
Length=690553
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| ||||||||||| || || || ||||| || |||||||| | | | ||| || |||
Sbjct 639479 CAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGC-CGT 639537
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
|||| | || |||||||| | || | | ||||| || || || | ||| || || |
Sbjct 639538 CTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGGATACCTTCCTTGT 639597
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| ||||||| || | | || | ||||| | | ||||||||||| ||| || |
Sbjct 639598 CTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGG 639657
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATT 27265
|| || |||| ||| || || ||| | | || | || ||| |||| |||
Sbjct 639658 TCTTACCAGTCAAAGTCTTAACGAAGCTGTACAAAATTG-TAATAATTCATT 639708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934311958904
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