Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 318 7e-82
seq9 257 2e-63
seq10 82.4 1e-10
>seq5
Length=565208
Score = 318 bits (352), Expect = 7e-82
Identities = 900/1368 (66%), Gaps = 36/1368 (3%)
Strand=Plus/Minus
Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784
||||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||
Sbjct 296698 TGGTTCAAAACATTCATTATAACCCAATATTTGGGACGTGGATGCAGTAGGCATTGGTGC 296639
Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842
||| ||||| ||| | || ||| | || | ||| |||| | | | ||||||
Sbjct 296638 CATGGTCAAAGA--GTTTCTAATACCATGCTTCATGACATCTTCCCTCAAAGTATCCCAA 296581
Query 110843 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902
|| | || | || || |||||||| || |||||||| | ||||| || ||
Sbjct 296580 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCT 296521
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962
|||||||| | |||||||| || | || | || ||| | |||||| || |||
Sbjct 296520 GGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCC 296461
Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022
| || || ||||| || ||||||||||| | ||| | ||| || || |||
Sbjct 296460 ATAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAA 296401
Query 111023 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
||||| | | || ||| || || || || | |||||||||||||||| ||||
Sbjct 296400 TCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATT 296341
Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142
||||| |||| |||||| || || ||| ||||| || || |||| | |||||
Sbjct 296340 GGTCTATGTCTCATATTGGATCTTTTCGCTTCTTCAACAGGGTAGTAATTACGATCAATA 296281
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAA 111196
|||| ||||| ||| ||||||| || | ||||| || || ||||| | ||
Sbjct 296280 ACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAT 296221
Query 111197 TCAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247
| |||| || ||| |||| ||| || | ||| | ||| | || |||
Sbjct 296220 GTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA-ATGC--TGGCAAGGCAACAGAAGCC 296164
Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307
|| || |||||||| || || ||| | ||| |||||| | |||||| ||||||||
Sbjct 296163 AAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTT 296104
Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367
|| ||| || || || || ||||||||| ||| ||||||| |||||||| ||
Sbjct 296103 GATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAA 296044
Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGC 111426
| | | || || ||||| || || |||| || | ||| | | ||| || | |
Sbjct 296043 ACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGA 295984
Query 111427 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486
| || ||||| || | || || || ||||| || || || ||||||||
Sbjct 295983 GCCT----TAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAA 295928
Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATT 111545
||| || || |||| ||||| || || ||| |||| |||| | || |||
Sbjct 295927 CTCGTCGCCATAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAG 295869
Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605
||| || ||||| |||||||||||||| || |||||||| || | | ||| | ||
Sbjct 295868 TCCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAAT 295809
Query 111606 CTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665
|||| ||| ||||| | ||| ||||| || | |||| || || | ||||
Sbjct 295808 CTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATAT 295749
Query 111666 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 111721
| || |||||||| || || || | || | | || |||| | ||| | ||
Sbjct 295748 CAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGG 295690
Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781
| ||||| || || ||| ||||| || |||| ||| ||||| | || | || |
Sbjct 295689 TCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTA 295630
Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841
|| ||||| || ||| ||| | | | | | || |||||| || | ||||||
Sbjct 295629 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATA 295570
Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901
|| ||||| || || || ||||| || | | ||| | || ||||| | |||
Sbjct 295569 CCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATA 295510
Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961
||||||||||| |||||| | ||| ||| |||||| || ||| |||| |||||||||
Sbjct 295509 GAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCA 295450
Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTC 112020
|| || | ||||| | || ||| | || || || | ||||| || ||||| ||
Sbjct 295449 TTAAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTC 295391
Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
| | | || |||||| ||||||||||| | |||||| | |||
Sbjct 295390 TAGAGCCGCTTCGATGTCTCTGCCGTGGATGCCCAGTGCGACTCTCAT 295343
>seq9
Length=443128
Score = 257 bits (284), Expect = 2e-63
Identities = 918/1409 (65%), Gaps = 52/1409 (4%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGG 110765
||| ||||||| || |||||| || ||||| |||| | |||||| |||| | || |
Sbjct 233720 GTACATGTTTGAAGTCACTGGTTCGAAACATTCGTTAT-ATCCAAGAATTTGAGAAGTTG 233778
Query 110766 AGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGA---T 110820
|||| ||||||||||| ||||| ||||| ||| | | | || | | |||| |
Sbjct 233779 AGGCAGTTGGCATTGGCGCCATTGTCAAAGA--GTTTCTTA-ATCCATGT--TTGACAAT 233833
Query 110821 G-CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTC 110877
| | || ||| || ||||| || | | | | ||| || | |||| |||||||
Sbjct 233834 GTCCTTTCTTAAGGTT-TCCCAATCCCACAT-ACCAAATGGCTTAGCATTCC-ACATGTC 233890
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
||| || || | |||| || || |||||||| || || || ||| ||||| |
Sbjct 233891 AAATTGTAGAATACCTTTAGAGGCTGGAGAACCTTCGAAAGTAGAATACTTACCTTC--C 233948
Query 110938 TTCAG--CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995
||| | ||||||||||| || || || | || ||||| |||||||| || || |
Sbjct 233949 TTCTGTGCCAATTCACAGGAGGCTTCAAGAGTAGCATGATAAATGGTTTCGAAAATCTGT 234008
Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATC 111054
|||| | ||||| ||||| ||||| | |||| ||| || ||| | |||
Sbjct 234009 TTGTTCAAAGTTTGAGCTTCTTCTGATTCAAAAG-GTAGACGCAACATCATATAGGTATC 234067
Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 111114
|| ||||||||||||||||| |||||||||| || | |||||| || |||| ||
Sbjct 234068 GGCCAGACCTTGAACACCCAAGGCAATAGGTCTATGCCTCATATTTGAATTTCTGGCTTC 234127
Query 111115 CTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174
||| |||||| |||| | ||| ||||||| ||| | || | ||||| | || |
Sbjct 234128 AGGAACTGGATAATAATTACGGTCGATGACTCTGTTCAAGTTATGGGTAATGACTTTAGC 234187
Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA------TTGAC 111222
|||||||| | | || ||| | || | ||| |||||| | |||
Sbjct 234188 AATTTCATGTAAACTCTCGAAATTATAACTTGCAGTTTTACCATCTTCAGACATCTCGAC 234247
Query 111223 ATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTA 111282
| | ||| ||||| || || || | ||| ||||| || || ||||| | ||
Sbjct 234248 AAATGCTGGGAGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATA 234307
Query 111283 CTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACT 111342
||| | ||||| ||| |||||||| ||||| || ||||| |||| |||||| |
Sbjct 234308 CTCGACGATTTCACAACACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGT 234367
Query 111343 CTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTT 111402
||| |||| || || |||||||| | |||| | || || || || || || |||| ||
Sbjct 234368 CTTTCTGTTACATGCGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTG 234427
Query 111403 GAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCT 111461
| ||| || | ||| ||| | | ||| | ||||| || | || || ||| |
Sbjct 234428 TAAAATGGCATACCATAACTTTTG-GGC---TTTAATGGTTTTACCACGACCTTCCCTTT 234483
Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521
|||| || || || ||||||| || |||||| | || | |||||| ||
Sbjct 234484 CGTAACGGGTATATAGCTCTTCAAATTCGTCACCCCAGACATCATCTAAACCTGGGGCAG 234543
Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581
||| | || | || ||| ||||| | || | ||| || ||||| |||||||| |
Sbjct 234544 CACTGGGAGAAAATAAAGTCCAGGGACCATCCTCTTGAACACGTTTCATAAAAAGGTCAG 234603
Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
|||||||||| | | || | ||| || ||| ||||| | ||| ||| | ||
Sbjct 234604 GAATCCACAGAGCAGGGAATAAATCCCTTGCACGAATTTCTTCTTTACCATGGGTTTTTC 234663
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAGATA-----GACTGCGA 111695
| || | || || | |||||| ||||||||||| | ||||| | | ||
Sbjct 234664 TAATATCGACAAAGTCGAAGATATCTGCGTGCCATGGTTCCAAGAAAAGGGCAAAGGCAC 234723
Query 111696 TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755
|| || ||| | || |||| | ||||| || || || ||| || || ||||
Sbjct 234724 CAGGTCTCTTGTTA---CCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAA 234780
Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815
||| ||||| | |||| ||| ||| || || || ||| ||| ||| |
Sbjct 234781 TCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAAC 234840
Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875
| | | || || | |||| ||| || || ||| || || ||||| ||
Sbjct 234841 GGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTT 234900
Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935
| | ||| |||| ||||| | || ||||| ||||| |||| || ||||| || |
Sbjct 234901 TCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAG 234960
Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 111995
|||| || || ||| |||||||| || || | |||||| | |||||| |||| |||
Sbjct 234961 ACATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAA-ATAT 235019
Query 111996 CTT-GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054
||| |||||| | ||| |||| || |||||||| || || |||||||| ||
Sbjct 235020 CTTAATGACATCAAATTGTAGGTCTTCAGCACAGAATCGATATCACTACCGTGGATACCT 235079
Query 112055 ATTGCGACCCGCATGAACATGTACTGTGG 112083
| || || ||||| | || || ||||||
Sbjct 235080 AGCGCCACACGCATAACCAAGTGCTGTGG 235108
>seq10
Length=743843
Score = 82.4 bits (90), Expect = 1e-10
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||| || |||| | |||| | ||| || |||||| | |||
Sbjct 391436 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCG 391377
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| | ||| | |||||||||||| |||| | | ||| || ||||||||||||| |
Sbjct 391376 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 391317
Query 122779 CCCTCCACACACGCAAACGC 122798
|| || | | | ||||| ||
Sbjct 391316 CCTTCGATAGAGGCAAAGGC 391297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
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