Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 237 2e-57 seq9 149 7e-31 >seq5 Length=565208 Score = 237 bits (262), Expect = 2e-57 Identities = 828/1276 (65%), Gaps = 40/1276 (3%) Strand=Plus/Plus Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389 ||||| | || ||||||||||| |||| ||| ||||||||| ||| ||| | ||||| Sbjct 295436 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 295495 Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449 | ||||||||||| ||| | ||||| || | ||| | | || ||||| || || Sbjct 295496 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 295555 Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509 || ||||| |||||||| | || |||||| || | | | | | ||| ||| Sbjct 295556 AAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTCAACTGGTTCTTACATT 295615 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || ||||| ||| || | || | ||||| ||| |||| || ||||| ||| Sbjct 295616 GCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAACACC 295675 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625 || || ||||| | || | | || | |||| || | | || | || || || Sbjct 295676 GCCCGTTATGTCGACCAGGGT-GGTAACAAAAGACCTGGCGCCTTTGCCCTGTACCTGGA 295734 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 |||||||| || ||||| | || || |||| | | ||||| ||| | || || Sbjct 295735 ACCATGGCATGCTGATATTTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGAAGA 295794 Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 | |||| | ||| | || | ||||| |||||||| ||||| ||||||||| | | Sbjct 295795 AATTC-GTGCAAGAGATTTGTTTCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTG 295853 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGA- 104802 |||| |||| ||| | |||| || | || | |||| ||| || |||||||| ||| Sbjct 295854 TTGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCTGGTCTAAGCGAC 295912 Query 104803 TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC 104862 || | || || ||||||||||| || || || ||||| |||||||||| | Sbjct 295913 TGTTAT-GGCGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG---G 295968 Query 104863 TGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 | ||| | ||| | | ||| | | ||| | | | ||||| || || || Sbjct 295969 TAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGGG 296028 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 |||||| | | |||| || || || || ||| |||| ||| ||||| || || || Sbjct 296029 TACACCTTTTGTCGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTAGG 296088 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 ||| |||||| || || | || ||||| | || | ||| || || || Sbjct 296089 TGTTATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGAAAC 296148 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCA--AGTATGTGGATC--CAGA----- 105093 ||||| |||||| | || || | || || ||| | | || | | |||| Sbjct 296149 TGCTGTTTGTAACTTGGCTTCTGTTGC-CTTGCCAGCATTCATTGAAACGTCAGAGGACG 296207 Query 105094 GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAA 105149 | |||| |||| | | ||||| | |||||| || | ||| ||| || | Sbjct 296208 GCCAAACTTCTACATACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTCGTA 296267 Query 105150 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATA 105209 | ||||||||||||||||| | |||| ||||| ||||| || | ||| |||| Sbjct 296268 ATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAAAAGATCCAATA 296327 Query 105210 TGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTC 105269 ||||||| | ||||||| | | |||||||| ||| | || || |||| ||| Sbjct 296328 TGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTTTGGCTGACACTTTCA-----TGTT 296382 Query 105270 GCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGAC 105324 || ||| | |||||||| || || || | | ||| | || ||||| || Sbjct 296383 GCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTTGAAAC 296442 Query 105325 CATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGA 105384 || ||||| ||| || | || || || || | || | || || ||||| || Sbjct 296443 AATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGACCATACGA 296502 Query 105385 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA 105444 |||||| | |||||||||||||| ||||| | ||||| || |||||||||| | | Sbjct 296503 AACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ACCAAA 296561 Query 105445 GACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTC 105503 ||| | || | || ||||| || | | |||| ||| | || | ||| || Sbjct 296562 AACCCTACGGCATGTGGGATTGGGATACTTTGAGGGAAGATGTCATGAAGCATGGTATTA 296621 Query 105504 GTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 105563 | ||| | | |||||| |||||||| || || ||||| | ||||| |||||| ||| Sbjct 296622 GAAACTCTTTGACCATGGCACCAATGCCTACTGCATCCACGTCCCAAATATTGGGTTATA 296681 Query 105564 ATGAATGCTTTGAACC 105579 ||||||| |||||||| Sbjct 296682 ATGAATGTTTTGAACC 296697 >seq9 Length=443128 Score = 149 bits (164), Expect = 7e-31 Identities = 883/1392 (63%), Gaps = 56/1392 (4%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| || || | ||||| ||||| | ||||| || || || || |||||||| Sbjct 235108 CCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGATTCTGTG 235049 Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 || |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | || Sbjct 235048 CTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 234990 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || |||||||| ||| ||||||||||| || ||||| || |||| ||||| || Sbjct 234989 TAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 234930 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || | ||||| |||| ||| | | || ||||| || || ||| || || Sbjct 234929 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 234870 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||| |||| | || || | | | | ||| ||| ||| || || || Sbjct 234869 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 234810 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| ||| |||| | ||||| ||| |||| || || ||| || || || ||||| Sbjct 234809 CGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 234750 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT-----CTATCTT-GAGCCATGGCA 104634 | ||| || || ||| || || || | | |||| || |||||||| Sbjct 234749 GGACCAA---GGAGGTAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAACCATGGCA 234693 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| |||||| | || || | || | | | ||| ||| | || || | ||| Sbjct 234692 CGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAATTC-GTG 234634 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | ||||| |||||||| || || || ||||| | ||| | ||| Sbjct 234633 CAAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 234574 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| ||| || | |||| ||| || || ||| | |||| | ||||| Sbjct 234573 ATGGTCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 234514 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | || ||||||| || || || ||||| |||||||| | | || | Sbjct 234513 ACGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCATTA 234457 Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | | ||| | || ||| | |||| | ||||| || || |||||||| | | Sbjct 234456 AAGCCCAAAAGTTATGGTATGCCATTTTACAAG-CACAAACAGAAACAGGTACACCTTTC 234398 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||| ||||||| ||||| |||||| ||||| || ||| |||| |||||| || || Sbjct 234397 ATGGTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 234338 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 ||||| | ||| |||||| | || | | | | |||||| || || || ||| Sbjct 234337 TCATCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGCCGTTTGT 234278 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA--------- 105101 || || || || || || ||||| || || || || ||| | | |||| Sbjct 234277 AATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGATGGTAAAAC 234222 Query 105102 --CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 || | | ||| || | | || ||| || | ||| | ||| | ||| | || Sbjct 234221 TGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTCATTACCCATAACTTGAA 234162 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 |||||| || || | |||| ||| || ||| || | || || |||||||| || Sbjct 234161 CAGAGTCATCGACCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAGGCA 234102 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 | || |||| | |||||||| ||||| || ||| | || | | || | | Sbjct 234101 TAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTACC 234042 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||||| || || ||||| | | || | || || || ||||| ||||| || Sbjct 234041 TTTTGAATCAGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATTTATCATGC 233982 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||||||| || | || |||||| || || ||| ||| || || || || Sbjct 233981 TACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCTACTTTCGAAGG 233922 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456 ||||||||| || |||| | || |||||||| |||||| | | | || ||| || Sbjct 233921 TTCTCCAGCCTCTAAAGGTATTCTACAATTTGACATGTGGAATGCTAAG-CCA---TTTG 233866 Query 105457 CTA----CGACTGGGAAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAAC 105508 || || |||||| | || ||| || | || |||| | | || | | | ||| Sbjct 233865 GTATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC 233810 Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGA 105567 | | ||||| ||||||||||| ||||| || | |||| |||||| | |||| || Sbjct 233809 TCTTTGACAATGGCGCCAATGCCAACTGCCTCAACTTCTCAAATTCTTGGAT-ATAACGA 233751 Query 105568 ATGCTTTGAACC 105579 ||| || ||||| Sbjct 233750 ATGTTTCGAACC 233739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260676057080