Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 5e-18
seq11 82.4 5e-11
>seq12
Length=1023116
Score = 105 bits (116), Expect = 5e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||| | || || ||| || ||| | || |||||| |
Sbjct 60753 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 60694
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | || ||||| |||||| |||||||||||| |||| || |
Sbjct 60693 GATACTATTGATAAC--GTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATC 60636
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| | || || ||||| || || ||| |||| |||| | | ||||||||| ||||
Sbjct 60635 AGCAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACA 60576
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001
|||||||||| ||| |||||| |||||||| ||
Sbjct 60575 ACATCCAAAAGGAGTCCACTTTACATTTGGTGTT 60542
>seq11
Length=690553
Score = 82.4 bits (90), Expect = 5e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | || || |||||||| || ||||||||
Sbjct 639598 GACAAGGAAGGTATCCCACCCGACCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAA 639539
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | || || || |||||||||||||| || |||||| ||||||||||||
Sbjct 639538 GACGGCAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTTTTG 639479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862326269759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |