Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 7e-22
seq11 105 2e-17
>seq12
Length=1023116
Score = 120 bits (132), Expect = 7e-22
Identities = 162/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || ||||| || ||||| |||| ||| ||||| |||||||| |
Sbjct 60319 CAAG-TGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTACCATCTTCCA 60377
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| || || | ||||| ||||| | | || |||||||| |||||||
Sbjct 60378 GTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAA 60437
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||||| | || | |||| ||| || || || |||||||| || || |
Sbjct 60438 TTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTAC 60497
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| || || ||||| || |||| |||||| ||| |||| |||
Sbjct 60498 CAGTCAGCGTCTTAACAAAGATCTGCATACCACCTCTTAGTCT 60540
Score = 107 bits (118), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| || |||||||||||||| || | | |||||| |||||||| |
Sbjct 470241 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCA 470183
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| ||||| |
Sbjct 470182 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGA 470123
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 470122 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTAC 470063
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 470062 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 470032
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| | || | ||| | |||||| || |||||||||||||| |||| || |||
Sbjct 59849 CTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTT 59908
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || || || || ||||| | ||||| || || | | || |||
Sbjct 59909 CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCT 59968
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || ||||||||| ||||| | || | |||| || || || || ||
Sbjct 59969 TCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGG 60028
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || ||||| ||||| | ||||||
Sbjct 60029 GTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| | || | ||| | ||| ||||| |||||||||||||| |||| || |||
Sbjct 60533 CTTAGTCTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTT 60592
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || || || || ||||| | |||||||| || | | || |||
Sbjct 60593 CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCT 60652
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || ||||||||| ||||| | || | | || ||| || ||||| |
Sbjct 60653 TCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAAT 60712
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| || || | |||||
Sbjct 60713 GTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
>seq11
Length=690553
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || |||||||||||||| || | ||||||||| || ||||| |
Sbjct 639488 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTCTTCCAATTG 639547
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| ||||| ||||| | || || ||||| | | ||| |||||||| ||||| || ||
Sbjct 639548 CTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGGATACCTTCCTTGTCTTGGATCTT 639607
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | | |||| ||| || ||||| | ||| || || || || ||
Sbjct 639608 GGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 639667
Query 152081 GAGAGTCTTCACGAAG 152096
| |||||| ||||||
Sbjct 639668 CAAAGTCTTAACGAAG 639683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820548683407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |