Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11 176 9e-39
seq12 172 1e-37
seq9 165 2e-35
>seq11
Length=690553
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| | || | ||| || ||
Sbjct 639483 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTCTTCC 639542
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||||||||| | ||||||||| || ||||| ||||||||||||
Sbjct 639543 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTGGGATACCTTCCTTGTCTTGG 639602
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 639603 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTA 639662
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 639663 CCAGTCAAAGTCTTAACGAA 639682
>seq12
Length=1023116
Score = 172 bits (190), Expect = 1e-37
Identities = 155/195 (79%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| || || | |||||| || | ||| || || |||||
Sbjct 470226 TTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAA 470167
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| || ||||| ||||||||||||||||| | || || |
Sbjct 470166 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 470107
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 470106 GTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 470047
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 470046 GAAAATTTGCATCTT 470032
Score = 156 bits (172), Expect = 9e-33
Identities = 162/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| |||||| || ||| ||||||||||||||||| | |||| || | || || ||
Sbjct 59861 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTC 59919
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
||||| || || ||||||||||| | ||||| || |||||||| || ||||| ||
Sbjct 59920 CAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTG 59979
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| |||| || ||| |||| |||||||| || | ||| || ||||| || || || ||
Sbjct 59980 AATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTTTT 60039
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| ||||||||||| ||||||||
Sbjct 60040 ACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 141 bits (156), Expect = 2e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| |||||| ||| || ||||||||||||||||| | |||| || | || || ||
Sbjct 60545 ACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTC 60603
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
||||| || || ||||||||||| | || || || |||||||| || ||||| ||
Sbjct 60604 CAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTCCTG 60663
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| |||| || ||| |||| ||||| || |||| ||||||||| | || || || ||
Sbjct 60664 AATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTT 60723
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||||||||| || || || |||||
Sbjct 60724 ACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || | ||| ||||| |||||| || ||||| || ||||
Sbjct 60070 ACCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGA 60129
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | || || || ||||| || || ||||| || | | |||||| || ||
Sbjct 60130 CAGTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGG 60189
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||| |||||||||||||| ||| ||| | || |||||||| |||| ||| ||
Sbjct 60190 GATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 60249
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || || ||||| || | ||| || || || || |||||
Sbjct 60250 CTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
>seq9
Length=443128
Score = 165 bits (182), Expect = 2e-35
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
||||| ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 63277 TGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 63219
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 63218 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 63159
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 63158 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 63099
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 63098 CAAAGTCTTGACAAA 63084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |