Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 >seq10 Length=743843 Score = 147 bits (162), Expect = 2e-30 Identities = 482/743 (65%), Gaps = 17/743 (2%) Strand=Plus/Minus Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 ||||| || || || || || |||| ||||| ||| | ||| ||| ||||||| Sbjct 391613 AAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTCAGCGTTCATACCTAGC 391554 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTT---A 23451 | ||||| | ||||| | ||| || || |||||| ||||| || | | Sbjct 391553 AAGGCAACTGGCAAGGCATCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 391494 Query 23452 ATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACAT 23511 ||| ||| |||||| || || ||| | || |||| ||||| || ||| Sbjct 391493 ATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGGGCGAACAACAAGCAT 391437 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| || || | ||||| || || | ||||||||| ||||| || || || || Sbjct 391436 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCG 391377 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||| | |||| || || | ||| || || | || || || ||||| ||||| | | Sbjct 391376 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 391317 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || | || |||||||| || || | | |||||| || | | || |||| Sbjct 391316 CCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATC 391257 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGTTTCAATTGCTTT 23747 ||| || | ||| | |||||| | || | | || || | ||| || || Sbjct 391256 CATCTTAGAGCCCACTCGGCCTTC----TCACCGATTTCTGGGATGGTGTGAATGGCATT 391201 Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 || | || |||| | | || | || || ||||| || | || || | Sbjct 391200 GAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAACAAGGAGTAGGT 391141 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 ||||||||||||||||||||| || || || ||||| |||| | || || | | Sbjct 391140 TTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGGAAC 391081 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 |||||| || | | || ||| | | || ||||| ||||||||||| ||| ||| || Sbjct 391080 TTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGC 391021 Query 23928 AAAGAAAGCAAGAAC-ATA-TTTTATAAAATGTCTTTCATCAGTTGATAAT-TTTTTCCA 23984 || || |||||||| || || ||||| ||| | ||| || | || ||||| Sbjct 391020 GAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATTCTGTTATTCCA 390961 Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044 ||||| |||||| || || ||||||| ||| ||| | ||||| ||| || |||||| Sbjct 390960 ATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAGGCTTCGGCACG 390901 Query 24045 CTTATACATTAGCCAAATATCAT 24067 |||||| | |||| || |||| Sbjct 390900 CTTATAAGCTTGCCAGATTTCAT 390878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487889183800