Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
>seq12
Length=1023116
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || | ||| | |||||||| ||| | || ||||| || ||||| ||||||||
Sbjct 59843 CCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 59902
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| | |||| || || ||||| || || || |||| | |||||| || | |||
Sbjct 59903 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 59962
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814
| | || |||||| ||| |||||| | ||| || |||||| ||| || ||
Sbjct 59963 ATACCTTCTTTGTCC-TGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAAC 60021
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 60022 CTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709
||| ||||| || || ||| ||||| ||||| || |||||||| | || | | ||
Sbjct 59629 TAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATC 59688
Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || ||||| ||||| || |||| | ||||||||| | |||| | ||||| ||
Sbjct 59689 TTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC 59748
Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
| || || ||||| || | || |||||| ||| || ||||| | ||||| |
Sbjct 59749 CTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGG 59807
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||| ||||||||||| || || ||||||||
Sbjct 59808 TCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 59841
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
||||| ||||| || |||||||| | || | | || || || ||||| ||||| ||
Sbjct 60335 TCCTTTTGAATATTGTAGTCGGATAACGTTCTACCATCTTCCAGTTGCTTACCGGCAAAA 60394
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791
|||| | ||||||||| | |||| | ||||| || ||| |||| | | |||
Sbjct 60395 ATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTCGACTTGACGTT 60453
Query 41792 GACACA-GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
| || |||||| || || ||||||| || || || ||||| ||||||||||| ||
Sbjct 60454 GTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAAC 60513
Query 41851 GAAAATCTGCAT 41862
|| ||||||||
Sbjct 60514 AAAGATCTGCAT 60525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303901760400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |