Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15 116 3e-21 >seq15 Length=1061158 Score = 116 bits (128), Expect = 3e-21 Identities = 414/645 (64%), Gaps = 39/645 (6%) Strand=Plus/Plus Query 101542 CATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTCATCTGCTTT 101601 ||| | ||||| |||| | ||||| || ||||| | ||| | | | ||| || | Sbjct 447835 CATTTTCATTTGAATTCTTGGGTGAGGATTATAATCTTCAATTTCGAAGTCTTCCAACCT 447894 Query 101602 AAAGTCATCAATGCATGAAACATTTCTAGCAAATCTA-AGTGTTGGAAACGGTCTAGGAG 101660 || ||||||||| | | | || | ||||| ||| | || || ||||| ||| Sbjct 447895 GAAATCATCAATGTCTTTTATGTCCCTT-CTAATCTTCAGTTTCGGGAATGGTCTTGGAT 447953 Query 101661 TTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTA 101720 || || | || ||| | || |||||||| || ||| | || ||||| || | Sbjct 447954 CTCTGGTGATTTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCCA 448013 Query 101721 TAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAA 101780 |||||| |||||||| || ||| | | | || | ||||||||| | ||| || | Sbjct 448014 GAGTATGAATAAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACA 448073 Query 101781 GAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840 ||| ||| ||||| ||||||||||| || || ||||| ||| || | ||| || | Sbjct 448074 GAGCATATGATGCAATATTAAATGGCACGCCCAAGCCCATGTCACAAGAACGTTGGTATA 448133 Query 101841 GTTGACAGGAAAG------CTTTCCA------------TC---------ACAGACATAAA 101873 ||| ||||| ||| ||| || || |||||||| Sbjct 448134 ACAAACATGAAAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAA 448193 Query 101874 ATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAG 101933 |||| || | || || || |||| |||| || || || | |||||||| Sbjct 448194 ATTGTGAGAAAATGTGGCATGGTGGCAGAGCCATCTTGTCAAAATCAGCTGGATTCCAAG 448253 Query 101934 CACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTA 101993 ||| ||| | || |||||||| ||| ||||| |||| ||| ||| | ||| || | Sbjct 448254 CACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATGAATGACCTGCTTCA 448313 Query 101994 ATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAA 102052 |||| |||| || | ||| ||| ||| | |||| | || |||| || |||||| Sbjct 448314 ATTGATCAATACCCTGTCCAGCATAGTCG-TCATCACACGTCTTGTATTTAGCGCCGAAA 448372 Query 102053 TGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCC----TTCATCTCTGTCATAAAA 102108 |||||||| || |||||||| || || || | ||| || ||| | ||||| || Sbjct 448373 TGCCTCCATTGGAATCCATAAACGGGCCCCAAATCCCCCACTTTCCTATCTGT----GAA 448428 Query 102109 ACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153 || | ||||||| | || | |||||||| | |||||||| Sbjct 448429 CCCCATCTTATCTAGATATTCACGGGATCCATTACCGTCCCAAAT 448473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251125153267