Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 4e-15
seq12 93.3 4e-14
>seq10
Length=729272
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 116981 GAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGC 117040
||||||||||||||||| || | ||||| | | || ||| || || || |
Sbjct 390122 GAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGA 390181
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
|| || ||||| || | |||| || |||||||| || || |||||| |||| ||
Sbjct 390182 CTAGTCGCCTTTGCCTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTC 390241
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
||| | ||||| | || | |||||||| |||| ||| ||||| | || | |||
Sbjct 390242 TGGTTGAAGAAGAGAGGTATGATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGA 390301
Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208
||||| ||| |||| ||||||||| || ||| ||||| ||||||
Sbjct 390302 GACGAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCATTTG 390349
>seq12
Length=1026045
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || |||||||| || | || |||||| | |
Sbjct 54394 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 54335
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| ||||| |||||||| |||||||| || || || | || ||
Sbjct 54334 GATACTATTGATAACG-TCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 54276
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| || || || || ||||| |||| | ||| | |||||||||
Sbjct 54275 ACAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAA 54216
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901
|||||| |||||| |||| | ||| |||||||
Sbjct 54215 CATCCAAAAGGAGTCCACTTTACATTTAGTGTT 54183
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || || ||||| || ||| | || || ||| | ||
Sbjct 53938 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 53879
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| || || || || || || | |||||
Sbjct 53878 GACACTATTGACAACG-TGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCA 53820
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| || || || || ||||| |||| | ||| | |||||||||
Sbjct 53819 ACAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAA 53760
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901
|||||| |||||| |||| | ||| |||||||
Sbjct 53759 CATCCAAAAGGAGTCCACTTTACATTTAGTGTT 53727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219090515920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |