Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15 150 1e-31 >seq15 Length=1061158 Score = 150 bits (166), Expect = 1e-31 Identities = 369/560 (66%), Gaps = 31/560 (6%) Strand=Plus/Plus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||| ||| | ||||| || || ||| || || | || ||| | | || ||||| Sbjct 447925 AATCTTCAGTTTCGGGAATGGTCTTGGATCTCTGGTGATTTGTTCTTTCAAGGCTTCAAT 447984 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | | ||||| || ||||| || | ||| |||||||| || || || | | || Sbjct 447985 GTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAATAAACTCACCTGGCTCCATGTC 448044 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || |||| ||| ||||| ||||| ||||| || Sbjct 448045 GACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGCACGCC 448104 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG------CTTTCCA----- 97224 | ||||| ||| || | ||| |||||| ||| ||||| ||| ||| Sbjct 448105 CAAGCCCATGTCACAAGAACGTTGGTATAACAAACATGAAAGGCGGGGCTTACCAGATCC 448164 Query 97225 -------TC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || || |||||||| || || | || || || |||| || Sbjct 448165 GTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAAAATGTGGCATGGTGGCAGAGC 448224 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 ||| || || ||| ||||||||||| ||| | ||||||||||| || || Sbjct 448225 CATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAATAATTCTTCTATCATAAGGATT 448284 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | |||||| |||||||||| || | |||| |||| | || Sbjct 448285 TGTCTTTAGTTTATGAATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGT- 448343 Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446 | | | || |||| |||| || || |||||||||||||||||||||||||| || || Sbjct 448344 CATCACACGTCTTG-TATTTAGCGCCGAAATGCCTCCATTGGAATCCATAAACGGGCCCC 448402 Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506 | || || ||| ||||| ||| || | |||||||| ||| | |||||||| Sbjct 448403 AAATCCCCCACTTTCCTATCTGTGAACCCCATCTTATCTAGATATTCACGGGATCCATTA 448462 Query 97507 GCATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 448463 CCGTCCCAAATCTTAACACC 448482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783928150690