Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 1e-22
seq11 107 3e-18
seq9 95.1 2e-14
>seq12
Length=1026045
Score = 122 bits (134), Expect = 1e-22
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || ||||||||||| || || || || || ||
Sbjct 469438 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 469379
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| ||| || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 469378 AGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 469319
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| || ||| ||| |||
Sbjct 469318 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 469259
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
||||| || || || ||||| ||||| || || | ||| |||||||| ||
Sbjct 469258 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209
Score = 107 bits (118), Expect = 3e-18
Identities = 108/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || ||||| || | ||||||||| ||| || ||||| || || ||
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGA-ATATTGTAGTCGGA 53998
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||||| ||| || | ||| || || ||||||||||| || || || || |||||
Sbjct 53999 TAACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 54058
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| ||||||||
Sbjct 54059 AATACCTTCCTTATCTTG 54076
Score = 107 bits (118), Expect = 3e-18
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| |||||||| || ||||||||||| || || || || || || || ||
Sbjct 54168 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 54227
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || | ||| || |||||||| |||||||| || ||||| ||||||
Sbjct 54228 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 54287
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| || || |||||| ||| ||| |||
Sbjct 54288 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACT 54347
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|| | ||| || |||||||| || || || || | || ||||||||
Sbjct 54348 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 102 bits (112), Expect = 1e-16
Identities = 154/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| |||||||| || ||||||||||| || || || || || || || ||
Sbjct 53712 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 53771
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || | ||| || |||||||| |||||||| || || || ||||||
Sbjct 53772 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGA 53831
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| ||||| || ||| || ||| ||| ||
Sbjct 53832 ATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACC 53891
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || || |||||||| |||| ||||| | || ||||||||
Sbjct 53892 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| || | ||||| |||| || | ||| ||||| ||| || ||||| || || ||
Sbjct 53484 CCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGA-ATATTGTAGTCGGA 53542
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||||| ||| || | ||| || || ||||||||||| || || || || |||||
Sbjct 53543 TAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 53602
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| ||||||||
Sbjct 53603 AATACCTTCCTTATCTTG 53620
>seq11
Length=679893
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || |||||||||||||| ||||| || || || || || ||
Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| || || ||||| || || ||||| ||||||||||| || || || ||
Sbjct 629610 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 629669
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||||||
Sbjct 629670 ATACCTTCCTTATCTTG 629686
>seq9
Length=442403
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || |||||||| |||||||| || || || || ||
Sbjct 64040 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63981
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 63980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63921
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 63920 ATACCTTCCTTGTCTTG 63904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743526242000640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |