Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10 120 3e-22 >seq10 Length=729272 Score = 120 bits (132), Expect = 3e-22 Identities = 334/507 (66%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 || || ||||| | ||| | |||||| || || || || || ||||||| |||| || Sbjct 390309 CCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTC 390250 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || ||||| || || | || || || ||||| ||||| | || || | | ||||| Sbjct 390249 TTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAG 390190 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATTC 14071 || | || || ||| |||||| | || | || | || |||||| || |||||| || Sbjct 390189 GCGACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTC 390131 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131 | || | || || || | ||| ||||| || ||| |||| | || || Sbjct 390130 GGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAAAATTCACTTTCCTT 390071 Query 14132 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189 || | ||| |||||| ||||| || | ||| || ||||||| || || ||||| Sbjct 390070 AGGGTCCTT--AATGTAGGTATCGATCAACAAGGAGTAGGTTTCAGAATGAATATTTTCA 390013 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249 || || || |||||||| || | | || || | ||| ||||| | | | || Sbjct 390012 ATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAG 389953 Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14309 |||| |||| ||||||||||| ||||| ||| ||| || ||||| || | | | Sbjct 389952 TTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTA 389893 Query 14310 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGAA 14366 |||||| || ||| | | ||| | | || |||||||| | ||||||||| Sbjct 389892 GAAATAAAAAATCTCTCGTTTTCGTTCATTCTGTTGTTCCAATCATGAATATCCTTAGAC 389833 Query 14367 AGATCTACTTCATCAACTGTCCAAAAA 14393 | ||| | ||| ||| | ||||| ||| Sbjct 389832 AAATCAATTTCTTCAGCGGTCCAGAAA 389806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727898057800