Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq10 150 2e-31
>seq10
Length=729272
Score = 150 bits (166), Expect = 2e-31
Identities = 541/838 (65%), Gaps = 11/838 (1%)
Strand=Plus/Minus
Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410
|| || ||||| || ||||| || ||| ||||| |||||||| ||||| || |||
Sbjct 390639 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 390580
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469
|| ||| || || ||||||||||| ||||| || ||| | ||| | | ||| |
Sbjct 390579 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 390521
Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529
||| | | | || | ||| ||||||| ||||||| ||||| ||||| ||
Sbjct 390520 GTTACCGAAGGCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 390461
Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589
| |||||||||| | || || | || || || || ||| ||
Sbjct 390460 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATCCAAGAAGTATCTTTGTTCAATTTC 390401
Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649
|||||||||| | | ||| | | || |||| | || | || | |||
Sbjct 390400 CACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGGGC 390341
Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709
|| | || || ||||| || || | || || ||||| | ||| | |||||| ||
Sbjct 390340 GAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGA 390281
Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769
|| || || || ||||||| |||| || || ||||| || || | ||||| || ||
Sbjct 390280 GAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACC 390221
Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTT 13829
||| ||||| | || || | | ||||| || | ||||| ||| |||||| | || |
Sbjct 390220 GGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTC 390161
Query 13830 TTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888
|| |||| |||||| || |||||| || | || | || || || |
Sbjct 390160 AGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATGGTGT 390102
Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAG 13946
|| |||||||| ||| ||| | || |||| | ||| |||||| ||||| || |
Sbjct 390101 GAATGGCATTGAACAAAAATTCACTTTCCTTAGGGTCCTT--AATGTAGGTATCGATCAA 390044
Query 13947 TAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCT 14006
||| || ||||||| || || ||||| || || || |||||||| |||| |
Sbjct 390043 CAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTT 389984
Query 14007 AGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACC 14066
|| |||| ||| || || | | | || |||| ||||||||||||||||||||||
Sbjct 389983 TGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 389924
Query 14067 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG 14126
||| ||| || ||||| || | | | |||||| || ||| | | ||| |
Sbjct 389923 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCAT 389864
Query 14127 T---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14181
| || |||||||| | ||||||||| | ||| | ||| ||| | ||||| |||
Sbjct 389863 TCTGTTGTTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 389806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588698299880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |