Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 5e-31
>seq12
Length=1026045
Score = 149 bits (164), Expect = 5e-31
Identities = 168/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||||||| ||||| | |||| ||||||||| | ||||| |||||||| || |
Sbjct 53721 AGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 53780
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
|||| |||| ||| || || ||||| ||||||| |||||| || | || | ||||||
Sbjct 53781 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCC 53840
Query 43012 TTTTCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCG 43069
|| || ||| ||| ||| || || || ||| |||||| || || || |||| |
Sbjct 53841 TTATC-CTGAATCTTGCTC-TTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGG 53898
Query 43070 TTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||||||||| || ||||||||||| ||||||||||||||
Sbjct 53899 TTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 131 bits (144), Expect = 1e-25
Identities = 171/233 (73%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||||||| ||||| | |||| ||||||||| | ||||| |||||||| || |
Sbjct 54177 AGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 54236
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
|||| |||| ||| || || ||||| ||||||| ||||||||| | || | |||||||
Sbjct 54237 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCT 54296
Query 43012 TTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACC 43068
|| || |||| | | | ||||| | ||| || || || ||||| || |
Sbjct 54297 TTGTC-CTGA--ATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAAT 54353
Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT--TTTCTTAATT 43119
||||| ||||| ||||| | ||| || |||||||||||||| | ||||| ||
Sbjct 54354 GTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTTAGTT 54406
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/219 (70%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 42895 CTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCG 42954
||||| |||| |||| |||| |||||||| | |||||| ||||| || || | |
Sbjct 53496 CTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA 53555
Query 42955 TCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTT 43014
|| |||| ||| || |||||||||||||| | |||||| || | || | |||||| ||
Sbjct 53556 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTA 53615
Query 43015 TCGCTGA----TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070
|| ||| || || ||||| || ||| |||||| || ||||| || | ||
Sbjct 53616 TC-TTGAATTTTCGAC---TTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGT 53671
Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || || || || || || ||||| || |||||
Sbjct 53672 AATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| || |||
Sbjct 469438 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 469379
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 469378 AGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 469319
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 469318 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 469259
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|||| || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 469258 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| |||| ||| |||||||| | |||||| |||||
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || |||||||||||||| | |||||| || | ||
Sbjct 54000 AACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 54059
Query 43003 ACACCTTCTTTTTCGCTGA----TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTC 43058
| |||||| || || ||| || || ||||| || ||| |||||| || ||
Sbjct 54060 ATACCTTCCTTATC-TTGAATTTTCGAC---TTGACGTTGTCAATCGTGTCGGAAGATTC 54115
Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| || | || || || || || || || || || ||||| || |||||
Sbjct 54116 GACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369520984986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |