Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq12 100 2e-16 >seq12 Length=1026045 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||||| ||||| || || ||||| ||||| || ||||| || || Sbjct 53711 ACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 53770 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | ||| |||| |||||| ||| ||| || || | || ||||| | || Sbjct 53771 CAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGG 53830 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || | | ||| |||||| | || ||| Sbjct 53831 AATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAAC 53890 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| ||||| || || |||||||| || ||||||||||| Sbjct 53891 CTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938 Score = 91.5 bits (100), Expect = 9e-14 Identities = 162/236 (69%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | ||| ||||| ||||| || || || ||||| || ||||| |||| Sbjct 469440 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAG 469381 Query 33201 ACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCC 33256 ||| ||||| || ||||||||||| ||| ||| || || | ||| ||||| Sbjct 469380 ACA----GAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 469325 Query 33257 GTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGT 33316 | || || ||||| || || ||| || || | | ||| ||||| | | Sbjct 469324 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGAT 469265 Query 33317 TGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | ||| || || || || || || || || | ||| || |||||||||||||| || Sbjct 469264 TCAACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777533953266