Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 183 3e-41
>seq10
Length=729272
Score = 183 bits (202), Expect = 3e-41
Identities = 559/852 (66%), Gaps = 29/852 (3%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || ||||| |||||||| ||||| || ||
Sbjct 390639 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 390580
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || ||||||||||| ||||| || |||| ||| | |||||||| ||
Sbjct 390579 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 390521
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | || | |||||||||||| ||||| | ||| || ||||||| ||
Sbjct 390520 GTTACCGAAGGCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 390461
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || |||| || || || |||| ||| ||| ||
Sbjct 390460 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATCC---AAGAAGTATCTTTGTTCAAT 390404
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | || | || || |||| | |
Sbjct 390403 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCA 390348
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||| | || | |
Sbjct 390347 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATT 390288
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| || || || | ||| ||||| | |||| || || | ||| || || | || |
Sbjct 390287 CGTTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGA 390228
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || || || | ||||| | | ||||| || | | ||||||||| ||
Sbjct 390227 AGGAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACA 390168
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 390167 -AGGCGTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTC 390113
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || ||| | | |||||||| ||| ||| || ||
Sbjct 390112 TGGGATGGTGTGAATGGCATTGAACAAAAATTCACTTTCCTTAGGGTCCTTAATGTAGGT 390053
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| |||||||||||||| ||| ||||||||||||||
Sbjct 390052 ATCGATCAACAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATA 389993
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| || |||||||||| | | || |||| | |||||||| ||
Sbjct 389992 GAAACTCTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 389933
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608
||| || |||||| ||| || ||||| ||||| | |||||| | | |||||
Sbjct 389932 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTT 389873
Query 13609 TTCTGACA---ACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGT 13665
||| || || |||||| ||| ||| || || ||||| | || ||| ||||
Sbjct 389872 TTCGTTCATTCTGTTGTTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGT 389813
Query 13666 CCAAAAAGAAGC 13677
||| ||||| ||
Sbjct 389812 CCAGAAAGATGC 389801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |