Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 1e-38
seq10 167 5e-36
seq9 138 3e-27
seq11 132 1e-25
>seq12
Length=1026045
Score = 176 bits (194), Expect = 1e-38
Identities = 179/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || | |||| |||||| || || || || || || || |||||
Sbjct 53709 ATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCG 53768
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| ||||| || |||||||| || | |||||||| || |||
Sbjct 53769 GACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGA 53828
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTC 104508
|| || ||||| |||||||||||| ||||| || || || || | || ||| || |||
Sbjct 53829 GGAATACCTTCCTTATCCTGAATC-TTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTC 53887
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || ||||| |||||||| || ||||| ||||| || |||||
Sbjct 53888 AACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 161 bits (178), Expect = 2e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || |||||||| ||||| |||| ||||| || ||||| ||||| || ||
Sbjct 53970 GTAGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTCAAGTTGCTTACCG 54029
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | ||||||||| || ||||| || ||||| ||||| ||||| || | ||
Sbjct 54030 GCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTCGACTTG 54089
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| ||||| || ||||| ||||||||||| || ||
Sbjct 54090 ACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTC 54149
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 54150 TTAACAAAGATCTGCAT 54166
Score = 158 bits (174), Expect = 3e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || |||||||| ||||| |||| ||||| || ||||| ||||| || ||
Sbjct 53514 GTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCG 53573
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | ||||||||| || ||||| || ||||| ||||| ||||| || | ||
Sbjct 53574 GCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTCGACTTG 53633
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| ||||| || ||||| ||||||||||| || ||
Sbjct 53634 ACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTC 53693
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 53694 TTAACAAAGATCTGCAT 53710
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| || | |||| |||||| || || || || || || || |||||
Sbjct 54165 ATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCG 54224
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| ||||| || |||||||| || | ||||||||||| |||
Sbjct 54225 GACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGA 54284
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| |||||||| |||| || || || || | ||||| || |||
Sbjct 54285 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCG 54344
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || ||||| || | || || ||||| || |||||
Sbjct 54345 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || |||||||| || || || || |||||||| |||||||| || ||||| | |||
Sbjct 469414 TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTGC 469355
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 469354 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 469295
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || ||||| |||||||||||||| ||
Sbjct 469294 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTACCGGTT 469235
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 469234 AAAGTCTTGACGAAAATTTGCATCTTG 469208
>seq10
Length=729272
Score = 167 bits (184), Expect = 5e-36
Identities = 376/556 (68%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC-TTAATAGATTG 268812
|||| || ||||| ||||| | |||||| | ||| ||||| | || || || |||||
Sbjct 389795 GCCGAAGCATCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCAT-GATTG 389853
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || ||| | || || ||| ||||| ||| ||||||| ||||| ||
Sbjct 389854 GAACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGC 389913
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||| ||||| ||||| ||||| | || || || |||| || || || |
Sbjct 389914 CGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAGT 389973
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| || || | |||| || || ||||| || || |||||||||||||| || |
Sbjct 389974 TCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAAC 390033
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
||| | || || ||||| || || ||| || ||| |||| |||||
Sbjct 390034 CTACTCCTTGTTGATCGATACCTACAT------TAAGGACCCTAAGGAAAGTGAATTTTT 390087
Query 269050 -TTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGA 269099
||| ||| | || || | | | ||||||| | || |||||||| |
Sbjct 390088 GTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAGTGGGCTCTAA 390143
Query 269100 AATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAG 269156
|||||| | || | |||||| || ||||| |||| || |||||| || | |
Sbjct 390144 GATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCG 390203
Query 269157 AAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTA 269216
||||| | ||||| || || || || ||| | || || ||||||||||| ||||| | |
Sbjct 390204 AAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGA 390263
Query 269217 TGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACT 269276
|||| || || || ||||||||||||||||| |||| ||||||||||| ||| |||||
Sbjct 390264 TGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACT 390323
Query 269277 TCGCTTGTTTATTATT 269292
| || || || || ||
Sbjct 390324 TTGCATGCTTGTTGTT 390339
>seq9
Length=442403
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| ||||| || |||||||| ||||| || ||||||
Sbjct 64043 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCA 63984
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 63983 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 63924
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 63923 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 63864
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 63863 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63823
>seq11
Length=679893
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 629547 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 629606
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| |||||| |||||||| | ||| || || ||||| || | || ||||| |||||
Sbjct 629607 GATAAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGT 629666
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| || ||||| | || ||||| || | ||| || || |||
Sbjct 629667 GGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 629726
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| |||| || || |||||||||||
Sbjct 629727 ACTTCTAAAGTGATGGTCTTACCAGT 629752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398149211036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |