Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 9e-22
>seq12
Length=1026045
Score = 118 bits (130), Expect = 9e-22
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|||||||||||||| | ||| ||||||||| |||||||| || | ||| || ||
Sbjct 54180 CTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 54239
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| ||||| |||||||| | | || || | ||| ||||| || | || ||| |||
Sbjct 54240 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTG 54299
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| |||||| ||||| | || ||||| | ||| || || | |||||||
Sbjct 54300 TCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATG 54359
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734
||||||||||| | ||| || |||||||| ||||| ||||||
Sbjct 54360 GTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTT 54402
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|||||||||||||| | ||| ||||||||| |||||||| || | ||| || ||
Sbjct 53724 CTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 53783
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| ||||| |||||||| | | || || | ||| || || || | || ||||||
Sbjct 53784 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTA 53843
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| ||| || ||| | | || || |||| ||| || ||| | |||||
Sbjct 53844 TCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 53903
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || |||||||| |||||||| |||||
Sbjct 53904 GTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||||||||| || | || || ||| ||||||||||| ||||| || |
Sbjct 53483 ACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGA 53542
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | || ||||| ||||||||| | |||| || | ||| || || ||
Sbjct 53543 TAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 53602
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||| || ||||||| ||||| | || || |||| ||| ||
Sbjct 53603 AATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGAC 53662
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || ||||| ||||| || || || || ||||| ||||||||
Sbjct 53663 CTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251112722017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |