Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq12 145 7e-30
seq11 102 7e-17
>seq12
Length=1026045
Score = 145 bits (160), Expect = 7e-30
Identities = 176/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || |||||||||| ||| |||||||| | ||||||||||||||| |
Sbjct 53927 AAAAATTTGCATACCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAAT 53986
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| || ||| | || || ||| || || || || ||| |||| || || || ||
Sbjct 53987 ATTGTAGTCGGATAACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTG 54046
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|| ||||||||||||||||| || || | |||||| | ||||||| | | | |||||
Sbjct 54047 TTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTC 54106
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || | || ||||| || ||||| || || || ||||||||||||||
Sbjct 54107 GGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || ||||| || || ||||| || |||||||| | ||| || ||| |
Sbjct 54168 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 54227
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || ||||| || || || ||||||| ||||| || ||||||||||||
Sbjct 54228 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 54287
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | |||||||| ||||||| | | ||| |||| |||||
Sbjct 54288 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACT 54347
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || |||||||| || || | ||| || ||||| || |||||
Sbjct 54348 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||||||||||||||||||||| | ||| || || |
Sbjct 469438 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 469379
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || ||| |||| || || || ||||||| |||||||| || || || ||
Sbjct 469378 AGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 469319
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | |||||||| || ||
Sbjct 469318 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 469259
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||| || || || || |||||
Sbjct 469258 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 469212
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | || |||| ||| | ||| ||||||||||| | || || |||
Sbjct 53484 CCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGAT 53543
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| ||||| || || ||| |||| || || || || || |||||||||
Sbjct 53544 AACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 53603
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | |||||| | ||||||| | | | ||||| | |||||
Sbjct 53604 ATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACC 53663
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| || ||||| || || || ||||||||||||||
Sbjct 53664 TCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || ||||| || || ||||| || |||||||| | ||| || ||| |
Sbjct 53712 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 53771
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || ||||| || || || ||||||| ||||| || || |||||||||
Sbjct 53772 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGA 53831
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | ||| || ||| ||| | | | |||||| | || ||
Sbjct 53832 ATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACC 53891
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || ||||| ||||| |||||||| ||||| || |||||
Sbjct 53892 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
>seq11
Length=679893
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||||||||| | ||| || ||
Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || || |||| || || ||| ||||||| |||||||| || || || ||
Sbjct 629610 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 629669
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | || || | |||||| | | | ||||||| || ||
Sbjct 629670 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 629729
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
|| | |||||||| || ||||| | ||| || || |||
Sbjct 629730 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 629768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291104738120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |