Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 113 7e-21 seq14 111 2e-20 >seq2 Length=800085 Score = 113 bits (124), Expect = 7e-21 Identities = 190/270 (70%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 246700 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 246642 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||| | | ||||| ||||||||| ||||||| ||| |||| ||||| | Sbjct 246641 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 246582 Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| ||||| ||| ||| | | |||| ||| || || | || || | Sbjct 246581 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTG 246523 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || | |||||||| || || ||||| | || || || ||||| | |||| Sbjct 246522 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 246463 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | | |||||||| || |||||| Sbjct 246462 GTAGAACCTTATATGGTTTCGGTGGTTAAT 246433 >seq14 Length=776644 Score = 111 bits (122), Expect = 2e-20 Identities = 189/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||||||||| ||||| ||||| ||||||||||| Sbjct 563737 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 563795 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||| | | || || ||||||||| ||||||| ||| |||| ||||| | Sbjct 563796 TAGAAGATTAGCTAGAAGAGGCGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 563855 Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | ||| ||||| ||| ||| | | |||| ||| || || | || || | Sbjct 563856 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTG 563914 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || | |||||||| || || ||||| | || || || ||||| | |||| Sbjct 563915 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 563974 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | |||||||| || ||||| Sbjct 563975 GTAGAACCTTATATGGTTTCGGTGGTTAA 564003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075184456781