Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 7e-21
seq14 111 2e-20
>seq2
Length=800085
Score = 113 bits (124), Expect = 7e-21
Identities = 190/270 (70%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 246700 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 246642
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | ||||| ||||||||| ||||||| ||| |||| ||||| |
Sbjct 246641 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 246582
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | ||| ||||| ||| ||| | | |||| ||| || || | || || |
Sbjct 246581 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTG 246523
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | |||||||| || || ||||| | || || || ||||| | ||||
Sbjct 246522 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 246463
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | | |||||||| || ||||||
Sbjct 246462 GTAGAACCTTATATGGTTTCGGTGGTTAAT 246433
>seq14
Length=776644
Score = 111 bits (122), Expect = 2e-20
Identities = 189/269 (70%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 563737 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 563795
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | || || ||||||||| ||||||| ||| |||| ||||| |
Sbjct 563796 TAGAAGATTAGCTAGAAGAGGCGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 563855
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | ||| ||||| ||| ||| | | |||| ||| || || | || || |
Sbjct 563856 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTG 563914
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | |||||||| || || ||||| | || || || ||||| | ||||
Sbjct 563915 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 563974
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | | |||||||| || |||||
Sbjct 563975 GTAGAACCTTATATGGTTTCGGTGGTTAA 564003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075184456781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |