Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 105 6e-18 seq12 104 2e-17 >seq9 Length=442403 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || || ||||| || | ||||| | ||| | ||||| ||||| || Sbjct 63823 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 63882 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||||| ||||| ||||| || || || || ||||||||| | Sbjct 63883 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 63942 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | ||||| |||||||||||| Sbjct 63943 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 64002 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | || | ||| ||||| | ||||| || Sbjct 64003 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 64040 >seq12 Length=1026045 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || ||| | || || | ||| | ||||| Sbjct 54394 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 54335 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | ||||| ||| ||| ||||||||||| || ||||| |||||| Sbjct 54334 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 54275 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | || || ||||| ||||| | ||||| | | |||||| ||| Sbjct 54274 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 54215 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || || ||| | ||| | || | ||||| ||||| || Sbjct 54214 ATCCAAAAGGAGTCCACTTTACATTTAGTGTTAAGACTAAGAGGTGG 54168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662298284240