Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 6e-55
seq15 120 8e-22
>seq5
Length=553973
Score = 230 bits (254), Expect = 6e-55
Identities = 1039/1627 (64%), Gaps = 55/1627 (3%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| | ||||| ||| |||||||| |||| || || || ||||| |||
Sbjct 294111 TTTACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCT 294170
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || ||||||||||| | ||||| | || |
Sbjct 294171 TG-TTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGA 294229
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| ||| ||||| |
Sbjct 294230 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTC 294289
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781
||| | ||||||| || ||| || ||| || ||| | ||||||||
Sbjct 294290 ----AACTGGTTCTTACATTGCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGA 294345
Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGG 363839
||||||| ||| | || || || | || |||||||||||||| | |||| | ||
Sbjct 294346 TTCGTGTTTTTAATAACACCGCCCGTTATGTCGACCAGGGTGGTAACAAAAGACC--TGG 294403
Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899
|| ||||| |||| || || || ||||| ||||||||||| ||| |||| || |
Sbjct 294404 CGCCTTTGCCCTGTACCTGGAACCATGGCATGCTGATATTTTTGATTTTATTGATATCAG 294463
Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959
|| ||| || ||||| ||| | |||||| | ||| |||| ||| || ||| || |
Sbjct 294464 AAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTGCTCTATGGATTCC 294523
Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019
|| | ||| |||||||| || || | | || |||| | | || | ||| |
Sbjct 294524 CGATCTTTTCATGAAGCGTGTCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCAACAGC 294583
Query 364020 ATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
||| ||||| ||| ||| | || ||||| | || |||||||| || |
Sbjct 294584 CGCTCCTGGTCTAAGCGACTGT-TACGGCGACGAGTTTGAAGCTCTATATACCCGCTACG 294642
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
|| | ||| | | | ||||||| ||| || || || |||||| | |||| ||
Sbjct 294643 AA----AAAGAAGGTCGTGGTAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTG 294698
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | | || |||||| | |||||| | |||
Sbjct 294699 GAAGCACAAACTGAAACGGGTACACCTTTTGTCGTTTATAAAGATGCTTGCAACAGAAAG 294758
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| ||||| | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 294759 TCTAACCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 294814
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||| ||| | ||||| ||||| ||||| || |||||| | || || | || | || ||
Sbjct 294815 TGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCTGTTGCCTTGCCAGC 294874
Query 364314 GT---TTGTAA------AAGATGG---TACTTTTGACCACCAGCATC-----TTTATGAC 364356
|| ||| || | || || |||| | || || | || ||| ||
Sbjct 294875 GTTCATTGAAACGTCAGAGGACGGCCAAACTTCT-ACATACAACTTCAAAAAATTA-CAC 294932
Query 364357 GTAA---CCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413
| || || | || |||| | ||| | ||| ||||| || ||||| || ||
Sbjct 294933 GAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCT 294992
Query 364414 ATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
|| |||| |||| | || |||||| | ||| | || |||| | | ||||| || ||
Sbjct 294993 GTTGAAGAAG-CGAGAAGATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGG 295051
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
| |||||| ||| ||| |||| | | |||||||| || || ||| | ||
Sbjct 295052 TTTGGCTGACACTTTCATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACT 295111
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||||| | |||||||||||||| ||| |||| | ||| ||||| ||||| | ||
Sbjct 295112 AAATATCCAAATCTTTGAAACAATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGC 295171
Query 364593 AAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652
||| | ||| ||| || | | || || || ||| || || | | | ||
Sbjct 295172 TCAAAAGGACGGACCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCA 295231
Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA 364712
||| ||| | ||| | | || | | | ||| | |||||||| | | |
Sbjct 295232 GTTCGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGATACTTTGAGGAAAGA 295291
Query 364713 CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTAC 364772
|| | ||||||||||| | | ||||| | | || || ||||| || || || ||
Sbjct 295292 TGTCATGAAGCATGGTATTAGAAACTCTTTGACCATGGCACCAATGCCTACTGCATCCAC 295351
Query 364773 TGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACG 364832
| || || | || | || || || || ||||| |||| |||| | || || ||
Sbjct 295352 ATCCCAAATATTGGGTTATAATGAATGTTTTGAACCAGTTACCTCCAATATGTACTCCCG 295411
Query 364833 CCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGA 364892
|| || | ||||| ||||| | || || || ||| || | ||| | ||
Sbjct 295412 TCGTGTCTTATCCGGTGAATTCCAAGTTGTGAACCCTTACTTACTGCGCGATTTGGTTGA 295471
Query 364893 CCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCA 364952
|| | |||| ||| | ||||| | ||| | || | || || || | ||
Sbjct 295472 TTTAGGTATTTGGGATGAGGGTATGAAACAGTATTTGATTACACAGAACGGCTCCATTCA 295531
Query 364953 GAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012
| ||| ||||| |||| ||||| | | |||||||| || |||||||||||
Sbjct 295532 AGGTTTACCAAATGTTCCACAAGAATTGAAGGATTTATACAAAACTGTCTGGGAAATTTC 295591
Query 365013 -CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGT 365071
|| | ||| ||||| | ||||| |||||||| || || |||| || || |
Sbjct 295592 ACAAAAG-ACTATCATTAACATGGCAGCCGATCGTTCTGTTTATATCGACCAATCTCATT 295650
Query 365072 CGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACG 365131
| || || | ||| || | ||||| | ||||| ||| |||||||| ||||
Sbjct 295651 CCTTGAATTTGTTCTTGCGTGCCCCAACTATGGGTAAGCTAACAAGTATGCATTTTTACG 295710
Query 365132 GGTGGAA 365138
|||||||
Sbjct 295711 GGTGGAA 295717
>seq15
Length=1061158
Score = 120 bits (132), Expect = 8e-22
Identities = 209/299 (70%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | ||||||| || ||| || | |
Sbjct 448480 TGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATA-AGATGGGGTTCACAG 448422
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| || ||| | || || ||||| ||||| |||||| | || || || ||
Sbjct 448421 ATAGGAAAGTGGGGGATTTGGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGCGCTA 448362
Query 111538 ACTACAAAACC----ATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAAT 111593
| ||||| || ||| |||||| ||| | |||||| | ||||||||| || |
Sbjct 448361 AATACAAGACGTGTGATG-ACGACT---ATGCTGGACAGGGTATTGATCAATTGAAGCAG 448306
Query 111594 GTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAAC 111653
|||||| || || | |||| || || | | | | |||||||||||||| |||||
Sbjct 448305 GTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAAT 448246
Query 111654 CCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
||| || || || || ||||| || |||||||| || || | | || ||||||||
Sbjct 448245 CCAGCTGATTTTGACAAGATGGCTCTGCCACCATGCCACATTTTCTCACAATTTTATGT 448187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |