Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 3e-28
seq12 132 4e-26
>seq9
Length=442403
Score = 140 bits (154), Expect = 3e-28
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || |
Sbjct 63822 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 63881
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | |
Sbjct 63882 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 63941
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | ||| | || || ||||||||||||||
Sbjct 63942 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 64001
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| |||| ||||| ||| ||||| | || |||
Sbjct 64002 AGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGT 64041
>seq12
Length=1026045
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || |||||||||||||| || | || || ||||| ||| |
Sbjct 469209 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 469268
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| || || ||||||||||| ||||| ||||| ||
Sbjct 469269 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 469328
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | | || | || || |||
Sbjct 469329 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTAC 469388
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 469389 AACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 469439
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| ||||||||||| | || | ||||| ||| | |
Sbjct 54394 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 54335
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | |||| ||||||||| ||||| || |||||||| || ||||||
Sbjct 54334 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 54275
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || | || || | ||| | ||||| ||||||
Sbjct 54274 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 54215
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
|| ||||| || ||||| |||||||||| ||
Sbjct 54214 ATCCAAAAGGAGTCCACTTTACATTTAGTGTT 54183
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| || | || ||||| || | ||||| || || ||| | ||
Sbjct 54166 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 54107
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||||||||||| ||||| |||||||| || || |||
Sbjct 54106 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 54047
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || || | || ||| | | || | ||||| |||||
Sbjct 54046 CAGAGGTTGATTTTTGCCGGTAAGCAACTTGAAGATGGCAGAACGTTATCCGACTACAAT 53987
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 53986 ATTCAAAAGGAATCTACTCTCCACTTGGTCTTGAGATTGAGAGGTGGT 53939
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| |||||| |||| |||||||| | || || || || ||| | ||
Sbjct 53938 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 53879
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || ||||| || ||||| |||||||| || || |||
Sbjct 53878 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAA 53819
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || | || || | ||| | ||||| ||||||
Sbjct 53818 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 53759
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
|| ||||| || ||||| |||||||||| ||
Sbjct 53758 ATCCAAAAGGAGTCCACTTTACATTTAGTGTT 53727
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| || | || ||||| || | ||||| || || ||| | ||
Sbjct 53710 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 53651
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||||||||||| ||||| |||||||| || || |||
Sbjct 53650 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 53591
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || || | || ||| | | || | ||||| |||||
Sbjct 53590 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACGTTATCCGACTACAAT 53531
Query 22399 ATTCAAAAAGAATCCAC 22415
|||||||| ||||||||
Sbjct 53530 ATTCAAAAGGAATCCAC 53514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727913037605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |