Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq15 105 6e-18
>seq15
Length=1061158
Score = 105 bits (116), Expect = 6e-18
Identities = 272/413 (66%), Gaps = 31/413 (8%)
Strand=Plus/Plus
Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG-TCTAAGACCAGTAACATGAGCAAG 20256
|| ||||| |||| || ||||||||||| || || || | | | | ||| | |||||
Sbjct 448001 TGTGCATCCCCCAGAGTATGAATAAACTCACCTGGCTCCATGTCGAC-AACTTTAGCAAT 448059
Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316
||| ||| || || | ||| ||||| ||||| || || ||||| |||||||| |
Sbjct 448060 CATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGCACGCCCAAGCCCATGTCACA 448119
Query 20317 CGACCTCTGATACAGCTGACAGGAAAG------CTCACC------GTCAGCT-------- 20356
|| | || || | | ||| ||||| || ||| ||| ||
Sbjct 448120 AGAACGTTGGTATAACAAACATGAAAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGG 448179
Query 20357 -------ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTC 20409
||||||||||| | || | ||| || || || || |||||| || ||
Sbjct 448180 GAAACTGACATAAAATTGTGAGAAAATGTGGCATGGTGGCAGAGCCATCTTGTCAAAATC 448239
Query 20410 CGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATC 20469
|| || ||||| |||| |||||| ||||||||||| | ||||| | |||| | ||
Sbjct 448240 AGCTGGATTCCAAGCACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG 448299
Query 20470 CACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGT 20528
| | | | |||||| |||| ||||| || | |||||| |||| | ||| | ||
Sbjct 448300 AATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTCATCACACGT-CTTGT 448358
Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCC 20581
| || || || |||||||| ||||| || ||||| || ||||||||||||
Sbjct 448359 ATTTAGCGCCGAAATGCCTCCATTGGAATCCATAAACGGGCCCCAAATCCCCC 448411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372706208280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |