Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq15 105 6e-18 >seq15 Length=1061158 Score = 105 bits (116), Expect = 6e-18 Identities = 272/413 (66%), Gaps = 31/413 (8%) Strand=Plus/Plus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG-TCTAAGACCAGTAACATGAGCAAG 20256 || ||||| |||| || ||||||||||| || || || | | | | ||| | ||||| Sbjct 448001 TGTGCATCCCCCAGAGTATGAATAAACTCACCTGGCTCCATGTCGAC-AACTTTAGCAAT 448059 Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316 ||| ||| || || | ||| ||||| ||||| || || ||||| |||||||| | Sbjct 448060 CATTCTAGTCAACAGAGCATATGATGCAATATTAAATGGCACGCCCAAGCCCATGTCACA 448119 Query 20317 CGACCTCTGATACAGCTGACAGGAAAG------CTCACC------GTCAGCT-------- 20356 || | || || | | ||| ||||| || ||| ||| || Sbjct 448120 AGAACGTTGGTATAACAAACATGAAAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGG 448179 Query 20357 -------ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTC 20409 ||||||||||| | || | ||| || || || || |||||| || || Sbjct 448180 GAAACTGACATAAAATTGTGAGAAAATGTGGCATGGTGGCAGAGCCATCTTGTCAAAATC 448239 Query 20410 CGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATC 20469 || || ||||| |||| |||||| ||||||||||| | ||||| | |||| | || Sbjct 448240 AGCTGGATTCCAAGCACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG 448299 Query 20470 CACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGT 20528 | | | | |||||| |||| ||||| || | |||||| |||| | ||| | || Sbjct 448300 AATGACCTGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTCATCACACGT-CTTGT 448358 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCC 20581 | || || || |||||||| ||||| || ||||| || |||||||||||| Sbjct 448359 ATTTAGCGCCGAAATGCCTCCATTGGAATCCATAAACGGGCCCCAAATCCCCC 448411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372706208280